DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and sp8

DIOPT Version :10

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001278991.1 Gene:sp8 / 100492429 XenbaseID:XB-GENE-1216189 Length:520 Species:Xenopus tropicalis


Alignment Length:473 Identity:134/473 - (28%)
Similarity:172/473 - (36%) Gaps:154/473 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 NNSSSSSPKLATPGDNSGNTSSYQQQYASQLVSGSGGGY-LNGSSSNSYGYSWHSSQSFHTKYQI 450
            ::||:|..|...|...|.:|||     :..|.|||..|: :.|||....|.|             
 Frog    38 SDSSASFGKGFHPWKRSSSTSS-----SCTLASGSLSGFSVGGSSRGGNGSS------------- 84

  Fly   451 HPPSAAASATASATATPTAQLGAQQQQQQQQQQQLQQLCPPAAPSTPSTSSSSI----------- 504
               ||||:|.|:|.|...|.|.:...               :...:|.:|:.|:           
 Frog    85 ---SAAAAAAAAAAAAAAAALVSDSF---------------SCGGSPGSSAFSLTSGVSGGGGGG 131

  Fly   505 --SSSSASSASRHMFVPPLTPPSSDPGSPGSSMVAAAAAAAAQRRTTPPPPYQ-------QGHVM 560
              ||.|.|:||     |.....|..|.|.||...||||||||.........:|       ...|.
 Frog   132 GGSSGSVSAAS-----PFANEYSVFPVSGGSQEAAAAAAAAAAAAAAAASHHQPVFLSKVHASVD 191

  Fly   561 GLINPPPTLQL---------------LGGAATGSNNSCTTT----LTTLTPAS-------AIQQQ 599
            ||.:..|.:.:               :..||.|..:|....    :...:|.:       |:|..
 Frog   192 GLQSIYPRVGMAHPYESWFKPSHPGEVSAAAAGGASSWWEVGAGWIDVQSPGAGAALHPGALQGS 256

  Fly   600 QQQPQQQQVPQQQPPPTPRSS-------------------GGGRRGRH----------------- 628
            ...|................|                   |||..|.|                 
 Frog   257 LHSPLGGYGTDYSAAGLGHFSAGGGGGAGSGGGAAGAGNGGGGGPGSHLLSSGGQHIMDGFKPVI 321

  Fly   629 ---SHHQPGTAAHIASLMSVRT-----------VRYNRR------NNPELEK--------RR--I 663
               |:..|.::...|..|...|           .||:.|      |..|.|:        ||  :
 Frog   322 GPGSYPDPSSSPLSAGSMLAPTGPLGGSPRSSARRYSGRATCDCPNCQEAERLGPAGASLRRKGL 386

  Fly   664 HHCDFVGCSKVYTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIV 728
            |.|...||.|||.|:||||||.|.||||:|:.|.|..|..||.|||||.||.|.|||.|.|.|.|
 Frog   387 HSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPV 451

  Fly   729 CERSFARSDHLALHMKRH 746
            |.:.|.|||||:.|:|.|
 Frog   452 CNKRFMRSDHLSKHVKTH 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 47/109 (43%)
C2H2 Zn finger 671..688 CDD:275368 12/16 (75%)
C2H2 Zn finger 696..718 CDD:275368 13/21 (62%)
zf-H2C2_2 710..735 CDD:463886 14/24 (58%)
C2H2 Zn finger 726..746 CDD:275368 11/19 (58%)
sp8NP_001278991.1 SP6-9_N 19..388 CDD:425402 84/390 (22%)
C2H2 Zn finger 392..411 CDD:275368 13/18 (72%)
zf-H2C2_2 403..430 CDD:463886 16/26 (62%)
C2H2 Zn finger 419..441 CDD:275368 13/21 (62%)
zf-H2C2_2 433..456 CDD:463886 13/22 (59%)
zf-C2H2 447..469 CDD:395048 12/21 (57%)
C2H2 Zn finger 449..469 CDD:275368 11/19 (58%)

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