DRSC/TRiP Functional Genomics Resources

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Protein Alignment dar1 and klf12b

DIOPT Version :9

Sequence 1:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001103335.1 Gene:klf12b / 100126139 ZFINID:ZDB-GENE-071004-22 Length:341 Species:Danio rerio


Alignment Length:329 Identity:120/329 - (36%)
Similarity:161/329 - (48%) Gaps:50/329 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   446 TKYQIHPPSAAASATASATATPTAQLGAQQQQQQQQQQQLQQLCPPAAPSTPSTSSSSISSSSAS 510
            :|.:..||....|:....|.|....|...:.:...          |.:.::|.||:.|.||||:|
Zfish    34 SKVKAEPPEDLLSSDQFQTQTEPVDLSINKTRTSS----------PLSNNSPVTSAFSPSSSSSS 88

  Fly   511 SASRHMFVPPLTPPSSDPGSP----GSSMVAAAAAAAAQR-----RTTPPP-----PYQQGHVMG 561
            |:|      |....|...|.|    ..|:|.::.....|:     ...||.     |.|...:..
Zfish    89 SSS------PSVIASVSSGMPSVLTSGSLVGSSHGVRGQQFLHIIHPVPPSSPSKLPSQVHRISV 147

  Fly   562 LINPPPTLQLLGGAATGSNNSCTTTLTTLTPASAIQQQQQQPQQQQVPQQQPPPTPRSSGGG--- 623
            ::...|.:.     .|...:..|.:.|.:.|  .:.:.:.|.:.|..|....|...:|....   
Zfish   148 VVQSLPLMY-----TTSVRSPSTLSSTIMLP--LLDEARCQDKAQTDPNGLSPRQIKSDSDDDDL 205

  Fly   624 -RRGRHSHHQPG-TAAHIA----SLMSVRTVRYNRR----NNPELEKRRIHHCDFVGCSKVYTKS 678
             .....|.::.| ||..||    ..||..::...||    .:|:.:|||||.|||.||:||||||
Zfish   206 PNVTLDSVNETGSTALSIARAVQDSMSPFSIESIRRPPPPESPDSKKRRIHRCDFAGCNKVYTKS 270

  Fly   679 SHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHLALHM 743
            ||||||:|.|||||||.|.|..|.|:||||||||||||||||.|||||..|:|||:||||||||.
Zfish   271 SHLKAHRRTHTGEKPYKCTWDGCTWKFARSDELTRHYRKHTGVKPFKCGDCDRSFSRSDHLALHR 335

  Fly   744 KRHL 747
            :||:
Zfish   336 RRHM 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 56/86 (65%)
C2H2 Zn finger 671..688 CDD:275368 14/16 (88%)
zf-H2C2_2 680..707 CDD:290200 18/26 (69%)
C2H2 Zn finger 696..718 CDD:275368 16/21 (76%)
zf-H2C2_2 710..735 CDD:290200 20/24 (83%)
C2H2 Zn finger 726..746 CDD:275368 13/19 (68%)
klf12bNP_001103335.1 zf-C2H2 256..280 CDD:278523 19/23 (83%)
C2H2 Zn finger 258..280 CDD:275368 18/21 (86%)
zf-H2C2_2 272..>289 CDD:290200 13/16 (81%)
C2H2 Zn finger 288..310 CDD:275368 16/21 (76%)
zf-H2C2_2 302..327 CDD:290200 20/24 (83%)
C2H2 Zn finger 318..338 CDD:275368 13/19 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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