DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10359 and Fcna

DIOPT Version :9

Sequence 1:NP_001137882.1 Gene:CG10359 / 38434 FlyBaseID:FBgn0035452 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_112638.2 Gene:Fcna / 83517 RGDID:621221 Length:335 Species:Rattus norvegicus


Alignment Length:279 Identity:98/279 - (35%)
Similarity:130/279 - (46%) Gaps:60/279 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 KGLRSTPGQ--------QPIFYGPSGLNG---------PTATRQL--------PSSCSYSFLSNH 280
            :||:.:||:        :|...||.|:.|         |...::|        |.||  ..|...
  Rat    70 RGLQGSPGKMGPAGSKGEPGTMGPPGVKGEKGERGTASPLGQKELGDALCRRGPRSC--KDLLTR 132

  Fly   281 GILKVQLT-------PESESFYVSCDED-----WTVILSRTSDDVNFERGWLDYRDGFGNLAGDF 333
            ||.   ||       |:.....|.||.|     |||...|....:||.|.|..|:.|||||..:|
  Rat   133 GIF---LTGWYTIYLPDCRPLTVLCDMDVDGGGWTVFQRRVDGSINFYRDWDSYKRGFGNLGTEF 194

  Fly   334 FIGLNKLHALTSSALHELRIVMEDFSGNVAYAGYSLFAIGSEKELYPLVLLGKFQDNLTPSAGDS 398
            ::|.:.||.||::...|||:.:.:|.|..::|.||.|.:..|:|.|.|. ||:|   |..:||||
  Rat   195 WLGNDYLHLLTANGNQELRVDLREFQGQTSFAKYSSFQVSGEQEKYKLT-LGQF---LEGTAGDS 255

  Fly   399 LSYHAGAKFSTVDQDNDNCLECNCALRHKGAGWFNNCAKSNLFGEYTTQNQPGE-----TGIWWD 458
            |:.|....|||.|||||.....|||....||.|:::|.:|||.|.|.    ||.     .||.| 
  Rat   256 LTKHNNMAFSTHDQDNDTNGGKNCAALFHGAWWYHDCHQSNLNGRYL----PGSHESYADGINW- 315

  Fly   459 TFSGQN---SLKRVRWMIR 474
             .||:.   |.|.....||
  Rat   316 -LSGRGHRYSYKVAEMKIR 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10359NP_001137882.1 FReD 267..476 CDD:238040 88/236 (37%)
FcnaNP_112638.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 47..114 10/43 (23%)
Collagen <67..108 CDD:396114 9/37 (24%)
FReD 123..333 CDD:238040 85/224 (38%)
A domain, contributes to trimerization. /evidence=ECO:0000250 123..162 13/43 (30%)
B domain, contributes to trimerization. /evidence=ECO:0000250 163..251 37/91 (41%)
Carbohydrate-binding. /evidence=ECO:0000250|UniProtKB:O00602 291..293 0/1 (0%)
P domain. /evidence=ECO:0000250|UniProtKB:O00602 326..335 3/8 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100073
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X25
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.710

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