DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10359 and fga

DIOPT Version :9

Sequence 1:NP_001137882.1 Gene:CG10359 / 38434 FlyBaseID:FBgn0035452 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001181918.1 Gene:fga / 378986 ZFINID:ZDB-GENE-031010-21 Length:684 Species:Danio rerio


Alignment Length:587 Identity:145/587 - (24%)
Similarity:213/587 - (36%) Gaps:204/587 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 YKELMTNLHDRV-GILVTLDEDQR----------------HRLEV-IDKKLDQLVESSSARMESM 115
            |..|...|..|: .|.:.:|...|                .|||| ||.|| :..:.|.|.....
Zfish   123 YMSLAEQLRQRITDIKIKIDRQLRLLDALKSQVKDQVVVMQRLEVDIDIKL-RTCKGSCASYSEF 186

  Fly   116 KA---------QQLDFLH--RLDSFEHIQRL----SRNTLDEL----------KGETDQVFGPRN 155
            ..         :|:|.|:  |:.|.|.:..|    ||...|.|          |.|...:||  :
Zfish   187 SVDRESYVTLDKQMDNLNAMRVQSVETVSSLGIMKSRPLKDVLVPTIYKSGTGKAEQKLLFG--D 249

  Fly   156 VRELKHKLRNRKKMKDISRTVRDVSQEQYPSSGIGTFNESNLNLSSRLDALATLLASTALSVRSV 220
            |.:::..|.......:.:.||     .::|:||.|:.::::....::             |||.|
Zfish   250 VGQMQLSLEAEGSTAESAATV-----SKFPTSGTGSTSQTSSKQCTK-------------SVRKV 296

  Fly   221 ----------QVEVAN------------------LSRAIRRQSRLIQGKGLRSTPGQQ----PIF 253
                      :|||::                  |:.|...:.....|..:..|.|.:    .:.
Zfish   297 ITHTKDGPVEKVEVSSSGPGCDDLGKLGISDSEFLTAAKDGKDLSRDGLKITVTGGDEKSLTSLS 361

  Fly   254 YGPSGLNG---------------------PTATRQL-PSSCSYS----------------FL--- 277
            :..|.|.|                     .|:|:.: ..|.|||                |:   
Zfish   362 HSTSDLGGFGGDFFKNLGTDNRKYASSSSSTSTKTVSDGSKSYSKTTLTSDPIFGDDLGAFMRGD 426

  Fly   278 --------------------------------------SNHGILKVQLTPESESFYVSCDED--- 301
                                                  ...|:.|::.....|...|.||:.   
Zfish   427 VEEDMPDIHARSVKSQDDRKAGFVGGDCVEIQQKHVNGGQSGMFKIKPAGSEEVVEVYCDQSTGL 491

  Fly   302 --WTVILSRTSDDVNFERGWLDYRDGFGNL----AGDFFIGLNKLHALTSSALHELRIVMEDFSG 360
              ||::..|....|||.|.|.:|.:|||.:    .|:.:||...||.||... ..||:.::|::|
Zfish   492 GGWTLVQQREDGSVNFNRTWKEYLNGFGQIDKQGKGEIWIGNKFLHLLTQKE-SLLRVELQDWTG 555

  Fly   361 NVAYAGYSLFAIGSEKELYPLVLL---GKFQDNLT---PSAGDSLSYHAGAKFSTVDQDNDNCLE 419
            ..|||.|:: .:|||.|.:||...   |...|.|.   |:.|..|| |||.||||.|:|:|...|
Zfish   556 AEAYAEYNI-KVGSEAEGFPLTASDYDGDAGDALVRGHPNLGSFLS-HAGMKFSTFDRDSDKWEE 618

  Fly   420 CNCALRHKGAGWFNNCAKSNLFGEYTT--QNQPG-------ETGIWWDTFS-GQNSLKRVRWMIR 474
             |||..:.|..|:|||..:||.|.|..  |..|.       |.|:.|..|. ...|||.||..||
Zfish   619 -NCAEMYGGGWWYNNCQSANLNGIYYKGGQYDPATKVPYEIENGVVWLPFKPADYSLKVVRMKIR 682

  Fly   475 PI 476
            |:
Zfish   683 PV 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10359NP_001137882.1 FReD 267..476 CDD:238040 87/291 (30%)
fgaNP_001181918.1 Fib_alpha 46..185 CDD:285864 17/62 (27%)
FReD 453..684 CDD:238040 82/234 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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