DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10359 and sca

DIOPT Version :9

Sequence 1:NP_001137882.1 Gene:CG10359 / 38434 FlyBaseID:FBgn0035452 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster


Alignment Length:555 Identity:126/555 - (22%)
Similarity:195/555 - (35%) Gaps:171/555 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 QTRSRIPNNFRSIATPPIAPRCDYKELMTNLHDRVGILVTLDEDQRHRLEVIDKKLDQLVESSSA 110
            |.||   :.|..:||    .|.||::|..:|           ..||.|.:..:..:.:|      
  Fly   225 QQRS---STFEDLAT----IRSDYQQLKLDL-----------AAQRERQQQTEVYVQEL------ 265

  Fly   111 RMESMKAQQLDFLHRLDSFEHIQRL--SRNTLDELKG--ETDQV----------------FGPRN 155
             .|.|..|:.||.|.|...:...|.  |..:::|..|  |.:|.                |....
  Fly   266 -REEMLQQEQDFQHALVKLQQRTRKDGSSASVEEESGSQEANQEQTGLETTADHKRRHCRFQSEQ 329

  Fly   156 VRELKHKLRNRKKMKD------ISRTVRDVSQEQYPSSGIGTFNESNLNLSSR---LDALATLLA 211
            :.:|:...||.::..:      |...||.:..||:      ....:|.||||:   ||.|.|.:.
  Fly   330 IHQLQLAQRNLRRQVNGLRFHHIDERVRSIEVEQH------RIANANFNLSSQIASLDKLHTSML 388

  Fly   212 STALSVRSVQV-----------EVANLSRA---IRRQSRLIQGKGLRSTPGQQPIFYGPS----- 257
            .....|..:|.           |::.|..|   |..:..||:.:|..:....|.:....|     
  Fly   389 ELLEDVEGLQTKMDKSIPELRHEISKLEFANAQITSEQSLIREEGTNAARSLQAMAVSVSVLQEE 453

  Fly   258 ----------------------------------GLNGP-------------------------- 262
                                              .||.|                          
  Fly   454 REGMRKLSANVDQLRTNVDRLQSLVNDEMKNKLTHLNKPHKRPHHQNVQAQMPQDDSPIDSVLAE 518

  Fly   263 --------------TATRQLPSSCSYSFLSNHGILKVQLTPESESFYVSCDED-WTVILSRTSDD 312
                          ....:||..||.......|:..:....:.......|..| ||.:..|....
  Fly   519 TLVSELENVETQYEAIINKLPHDCSEVHTQTDGLHLIAPAGQRHPLMTHCTADGWTTVQRRFDGS 583

  Fly   313 VNFERGWLDYRDGFGNLAGDFFIGLNKLHALTSSALHELRIVMEDFSGNVAYAGYSLFAIGSEKE 377
            .:|.|.|.||..|||...|:|:||..:||.||......|::.|:|...||..|.|..|.|.|..:
  Fly   584 ADFNRSWADYAQGFGAPGGEFWIGNEQLHHLTLDNCSRLQVQMQDIYDNVWVAEYKRFYISSRAD 648

  Fly   378 LYPLVLLGKFQDNLTPSAGDSLSYHAGAKFSTVDQDNDNCLECNCALRHKGAGWFNNCAKSNLFG 442
            .|.| .:.::..|    |.|:|:|..|.:||.:|.|.| ..:.:||..::|..||::|..:||.|
  Fly   649 GYRL-HIAEYSGN----ASDALNYQQGMQFSAIDDDRD-ISQTHCAANYEGGWWFSHCQHANLNG 707

  Fly   443 EYTTQNQPGETGIWWDTFSGQN---SLKRVRWMIR 474
            .|..    |.|  |:|  :.:|   ::|..|.:::
  Fly   708 RYNL----GLT--WFD--AARNEWIAVKSSRMLVK 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10359NP_001137882.1 FReD 267..476 CDD:238040 66/212 (31%)
scaNP_476710.2 PRK13923 <200..300 CDD:276343 25/99 (25%)
FBG 538..736 CDD:214548 66/211 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14151
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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