DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10359 and Fibcd1

DIOPT Version :9

Sequence 1:NP_001137882.1 Gene:CG10359 / 38434 FlyBaseID:FBgn0035452 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001101299.1 Gene:Fibcd1 / 311861 RGDID:1309097 Length:459 Species:Rattus norvegicus


Alignment Length:517 Identity:150/517 - (29%)
Similarity:220/517 - (42%) Gaps:121/517 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RPQLAA----IATVM----VLAAICGFGTGSVL-----EVPGVTQAPPLPPRNLRNNQTRSRIPN 53
            :||.|.    :.||:    ||.|:.  .||:||     ..||.                      
  Rat    22 KPQRAGCSYILCTVLLSLAVLLAVA--VTGAVLFLNHAHAPGT---------------------- 62

  Fly    54 NFRSIATPPIAPRCDYKELMTNLHDRVGILVTLDE-DQRHRLEVIDKKLDQLVESSSARMESMKA 117
                 |.|||        :.|........|||::. |..|...:||.:...|.: |.||:|.::|
  Rat    63 -----APPPI--------VSTGAAGANSALVTVERADSSHLSLLIDPRCPDLTD-SFARLEGIQA 113

  Fly   118 QQLDFLH------RLDSFEHIQRLSRNTLDELKGETDQVFGPR---NVRELKHKLRNRKKMKDIS 173
            ..|..|.      |||....:       ||.|   .||:  ||   ...||:.:....:|...:.
  Rat   114 SILRTLSEHQAQPRLDGAPEL-------LDAL---ADQL--PRLLARASELQAECAGLRKGHSLL 166

  Fly   174 RTVRDVSQEQYPSSGIGTFNESNLNLSSRLDALATLLASTALSVRSVQVEVANLSRAIRRQSRLI 238
                        ..|:.|       |.|....|..||:.:...:..:...|:::..|::|:    
  Rat   167 ------------GQGLST-------LQSEQGRLIQLLSESQGHMAHLVNSVSDVLEALQRE---- 208

  Fly   239 QGKGLRSTPGQQPIFYGPSGLNGP--TATRQLPSSCSYSFLS---NHGILKVQLTPESESFYVSC 298
              :||.....:..:...||....|  .|....|..|....||   :.|:..|..|.....|.|.|
  Rat   209 --RGLGRPRVKADLQRAPSRGARPRGCANGSRPRDCLDVLLSGQQDDGVYSVFPTHYPAGFQVYC 271

  Fly   299 D-----EDWTVILSRTSDDVNFERGWLDYRDGFGNLAGDFFIGLNKLHALTSSALHELRIVMEDF 358
            |     ..|||...|....|||.|||..||:|||.|.|:.::||.::||||:.|.:||.:.:|||
  Rat   272 DMRTDGGGWTVFQRREDGSVNFFRGWEAYREGFGKLTGEHWLGLKRIHALTTQAAYELHVDLEDF 336

  Fly   359 SGNVAYA-----GYSLFAIGSEKELYPLVLLGKFQDNLTPSAGDSLSYHAGAKFSTVDQDNDNCL 418
            ....|||     |..||::..|::.|||.:.     :.:.:|||||..|:|.:|:|.|:|:|:. 
  Rat   337 DNGTAYAHYGSFGVGLFSVDPEEDGYPLTVA-----DYSGTAGDSLLKHSGMRFTTKDRDSDHS- 395

  Fly   419 ECNCALRHKGAGWFNNCAKSNLFGEYTT-QNQPGETGIWWDTFSG-QNSLKRVRWMIRPISE 478
            |.|||..::||.|:.||..|||.|:|.. .:.....|:.|.:::| |.|||.....|||:.|
  Rat   396 ENNCAAFYRGAWWYRNCHTSNLNGQYLRGPHASYADGVEWSSWTGWQYSLKFSEMKIRPLRE 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10359NP_001137882.1 FReD 267..476 CDD:238040 85/223 (38%)
Fibcd1NP_001101299.1 FReD 239..455 CDD:238040 85/221 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100073
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X25
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.810

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