DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10359 and Tnr

DIOPT Version :9

Sequence 1:NP_001137882.1 Gene:CG10359 / 38434 FlyBaseID:FBgn0035452 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_037177.2 Gene:Tnr / 25567 RGDID:3886 Length:1358 Species:Rattus norvegicus


Alignment Length:565 Identity:142/565 - (25%)
Similarity:220/565 - (38%) Gaps:158/565 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SVLEVPGVTQAPPL---------PPRNLRNNQTRSRIPNNFRSIA-TPPIAP----RCDYKE--- 71
            :::.|.|...:.|:         ||:|:    |.|.:..:..::: :||:||    |..|:.   
  Rat   843 NLVAVHGTVTSEPIVGSITTGIDPPKNI----TISNVTKDSLTVSWSPPVAPFDYYRVSYRPTQV 903

  Fly    72 ---------------LMTNLHDRVGILVTLD----EDQRHRL-----EVIDKKLDQLVESSSARM 112
                           .:|.|:......::|:    .::..|:     ..:|..:| |:.::....
  Rat   904 GRLDSSVVPNTVTEFTITRLYPATEYEISLNSVRGREESERICTLVHTAMDSPMD-LIATNITPT 967

  Fly   113 ESM---KAQQLDFLHRLDSFEHIQRLSRNTLDELKGETDQVFGPRNVRELKHKLRNRKKMKDISR 174
            |::   ||...:..:.:....|.         .:.|||..|.|.....:|...|         .|
  Rat   968 EALLQWKAPMGEVENYVIVLTHF---------AMAGETILVDGVSEEFQLVDLL---------PR 1014

  Fly   175 TVRDVSQEQYPSSGIGTFNESNLNLSSRLDALATLLASTALSVRSVQVEVANLSRAIRRQSRLIQ 239
            |...|:  .|.:||.........|.|:.||..|.|.||                 .:.|||.||.
  Rat  1015 THYTVT--MYATSGPLVSGTIATNFSTLLDPPANLTAS-----------------EVTRQSALIS 1060

  Fly   240 GKGLR-----------STPGQ--------QPIFYGPSGLNGPT-----------ATRQL------ 268
            .:..|           ||.|.        :..:....||:..|           |||..      
  Rat  1061 WQPPRAAIENYVLTYKSTDGSRKELIVDAEDTWIRLEGLSENTDYTVLLQAAQEATRSSLTSTIF 1125

  Fly   269 ---------PSSCSYSFLSN---HGILKVQLTPE-SESFYVSCD-----EDWTVILSRTSDDVNF 315
                     |..|:...::.   .|:..:.|..| |....|.||     ..|.|...|.:...:|
  Rat  1126 TTGGRVFSHPQDCAQHLMNGDTLSGVYTIFLNGELSHKLQVYCDMTTDGGGWIVFQRRQNGQTDF 1190

  Fly   316 ERGWLDYRDGFGNLAGDFFIGLNKLHALTSSALHELRIVMEDFSGNVAYAGYSLFAIGSEKELYP 380
            .|.|.|||.|||||..:|::||:.:|.:|:...:|||:.|.| .....:|.|..||:...:.||.
  Rat  1191 FRKWADYRVGFGNLEDEFWLGLDNIHRITAQGRYELRVDMRD-GQEAVFAYYDKFAVEDSRSLYK 1254

  Fly   381 LVLLGKFQDNLTPSAGDSLSYHAGAKFSTVDQDNDNCLECNCALRHKGAGWFNNCAKSNLFGEYT 445
            |.:.|     ...:||||||||.|..|||.|:|||..: .|||:.:|||.|:.||.::||.|:| 
  Rat  1255 LRIGG-----YNGTAGDSLSYHQGRPFSTEDRDNDVAV-TNCAMSYKGAWWYKNCHRTNLNGKY- 1312

  Fly   446 TQNQPGET----GIWWDTFSGQN-SLKRVRWMIRPISEGIDDARR 485
                 ||:    ||.|..:.|.. |:..|...:||....:...|:
  Rat  1313 -----GESRHSQGINWYHWKGHEFSIPFVEMKMRPYIHRLTAGRK 1352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10359NP_001137882.1 FReD 267..476 CDD:238040 79/237 (33%)
TnrNP_037177.2 exchanger_TraA <190..>328 CDD:411343
EGF_Tenascin 203..231 CDD:376143
fn3 328..398 CDD:394996
fn3 416..496 CDD:394996
fn3 507..586 CDD:394996
FN3 595..679 CDD:238020
fn3 687..766 CDD:394996
fn3 776..855 CDD:394996 2/11 (18%)
fn3 865..944 CDD:394996 14/82 (17%)
fn3 954..1026 CDD:394996 18/92 (20%)
FN3 1042..1127 CDD:238020 20/101 (20%)
FReD 1134..1342 CDD:238040 78/220 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100073
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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