DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10359 and Tnr

DIOPT Version :9

Sequence 1:NP_001137882.1 Gene:CG10359 / 38434 FlyBaseID:FBgn0035452 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_071707.2 Gene:Tnr / 21960 MGIID:99516 Length:1358 Species:Mus musculus


Alignment Length:570 Identity:137/570 - (24%)
Similarity:213/570 - (37%) Gaps:168/570 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SVLEVPGVTQAPPL---------PPRNLR-NNQTR------------------------------ 48
            :::.|.|...:.|:         ||:|:. :|.|:                              
Mouse   843 NLVAVHGTVTSEPIVGSITTGIDPPKNITISNVTKDSLTVSWSSPVAPFDYYRVSYRPTQVGRLD 907

  Fly    49 -SRIPNNFRSIATPPIAPRCDYKELMTNLHDRVGILVTLDEDQR-----HRLEVIDKKLDQLVES 107
             |.:||.....|...:.|..:|:..:.::..|       :|.:|     |  ..:|..:| |:.:
Mouse   908 SSVVPNTVTEFAITRLYPATEYEISLNSVRGR-------EESERICTLVH--TAMDSPMD-LIAT 962

  Fly   108 SSARMESM---KAQQLDFLHRLDSFEHIQRLSRNTLDELKGETDQVFGPRNVRELKHKLRNRKKM 169
            :....|::   ||...:..:.:....|.         .:.|||..|.|.....:|...|.:    
Mouse   963 NITPTEALLQWKAPMGEVENYVIVLTHF---------AIAGETILVDGVSEEFQLVDLLPS---- 1014

  Fly   170 KDISRTVRDVSQEQYPSSGIGTFNESNLNLSSRLDALATLLASTALSVRSVQVEVANLSRAIRRQ 234
                   ...:...|.:||.........|.|:.||....|.||                 .:.||
Mouse  1015 -------THYTVTMYATSGPLMSGTIATNFSTLLDPPDNLTAS-----------------EVTRQ 1055

  Fly   235 SRLIQGKGLR-----------STPGQ--------QPIFYGPSGLNGPT-----------ATRQL- 268
            |.||..:..|           ||.|.        :..:....||:..|           |||.. 
Mouse  1056 SALISWQPPRAAIENYVLTYKSTDGSRKELIVDAEDTWIRLEGLSENTDYTVLLQAAQEATRSSL 1120

  Fly   269 --------------PSSCSYSFLSN---HGILKVQLTPE-SESFYVSCD-----EDWTVILSRTS 310
                          |..|:...::.   .|:..:.|..| |....|.||     ..|.|...|.:
Mouse  1121 TSTVFTTGGRVFSHPQDCAQHLMNGDTLSGVYTIFLNGELSHKLQVYCDMTTDGGGWIVFQRRQN 1185

  Fly   311 DDVNFERGWLDYRDGFGNLAGDFFIGLNKLHALTSSALHELRIVMEDFSGNVAYAGYSLFAIGSE 375
            ...:|.|.|.|||.|||||..:|::||:.:|.:|:...:|||:.|.| .....:|.|..||:...
Mouse  1186 GQTDFFRKWADYRVGFGNLEDEFWLGLDNIHRITAQGRYELRVDMRD-GQEAVFAYYDKFAVEDS 1249

  Fly   376 KELYPLVLLGKFQDNLTPSAGDSLSYHAGAKFSTVDQDNDNCLECNCALRHKGAGWFNNCAKSNL 440
            :.||. :.:|.:..    :||||||||.|..|||.|:|||..: .|||:.:|||.|:.||.::||
Mouse  1250 RSLYK-IRIGSYNG----TAGDSLSYHQGRPFSTEDRDNDVAV-TNCAMSYKGAWWYKNCHRTNL 1308

  Fly   441 FGEYTTQNQPGET----GIWWDTFSGQN-SLKRVRWMIRPISEGIDDARR 485
            .|:|      ||:    ||.|..:.|.. |:..|...:||....:...|:
Mouse  1309 NGKY------GESRHSQGINWYHWKGHEFSIPFVEMKMRPYIHRLTAGRK 1352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10359NP_001137882.1 FReD 267..476 CDD:238040 78/237 (33%)
TnrNP_071707.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..58
exchanger_TraA <190..>328 CDD:411343
EGF_Tenascin 203..231 CDD:376143
fn3 328..398 CDD:394996
fn3 416..496 CDD:394996
fn3 507..586 CDD:394996
FN3 595..679 CDD:238020
fn3 687..766 CDD:394996
fn3 776..855 CDD:394996 2/11 (18%)
fn3 865..944 CDD:394996 13/85 (15%)
fn3 954..1026 CDD:394996 15/92 (16%)
FN3 1042..1127 CDD:238020 19/101 (19%)
FBG 1134..1343 CDD:214548 78/221 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100073
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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