DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10359 and Fcna

DIOPT Version :9

Sequence 1:NP_001137882.1 Gene:CG10359 / 38434 FlyBaseID:FBgn0035452 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_032021.1 Gene:Fcna / 14133 MGIID:1340905 Length:334 Species:Mus musculus


Alignment Length:274 Identity:96/274 - (35%)
Similarity:132/274 - (48%) Gaps:51/274 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 KGLRSTPGQ--------QPIFYGPSGLN-----------------GPTATRQLPSSCSYSFLSNH 280
            :|.:.:||:        :|...||.|:.                 |.|..::.|.||  ..|...
Mouse    70 RGFQGSPGKMGPAGSKGEPGTMGPPGVKGEKGDTGAAPSLGEKELGDTLCQRGPRSC--KDLLTR 132

  Fly   281 GILKVQLT-------PESESFYVSCDED-----WTVILSRTSDDVNFERGWLDYRDGFGNLAGDF 333
            ||.   ||       |:.....|.||.|     |||...|....::|.|.|..|:.|||||..:|
Mouse   133 GIF---LTGWYTIHLPDCRPLTVLCDMDVDGGGWTVFQRRVDGSIDFFRDWDSYKRGFGNLGTEF 194

  Fly   334 FIGLNKLHALTSSALHELRIVMEDFSGNVAYAGYSLFAIGSEKELYPLVLLGKFQDNLTPSAGDS 398
            ::|.:.||.||::...|||:.::||.|..:||.||.|.:..|:|.|.|. ||:|   |..:||||
Mouse   195 WLGNDYLHLLTANGNQELRVDLQDFQGKGSYAKYSSFQVSEEQEKYKLT-LGQF---LEGTAGDS 255

  Fly   399 LSYHAGAKFSTVDQDND-NCLECNCALRHKGAGWFNNCAKSNLFGEYTT-QNQPGETGIWWDTFS 461
            |:.|....|:|.||||| |.:  |||....||.|::||.:|||.|.|.: .::....||.|.|..
Mouse   256 LTKHNNMSFTTHDQDNDANSM--NCAALFHGAWWYHNCHQSNLNGRYLSGSHESYADGINWGTGQ 318

  Fly   462 GQN-SLKRVRWMIR 474
            |.: |.|.....||
Mouse   319 GHHYSYKVAEMKIR 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10359NP_001137882.1 FReD 267..476 CDD:238040 87/223 (39%)
FcnaNP_032021.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 47..117 8/46 (17%)
Collagen 65..106 CDD:189968 7/35 (20%)
FReD 123..332 CDD:238040 85/219 (39%)
A domain, contributes to trimerization. /evidence=ECO:0000250 123..162 13/43 (30%)
B domain, contributes to trimerization. /evidence=ECO:0000250 163..251 38/91 (42%)
Carbohydrate-binding. /evidence=ECO:0000250|UniProtKB:O00602 290..292 1/1 (100%)
P domain. /evidence=ECO:0000250|UniProtKB:O00602 325..334 3/8 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100073
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X25
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.710

Return to query results.
Submit another query.