DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10359 and Tnc

DIOPT Version :10

Sequence 1:NP_001137882.1 Gene:CG10359 / 38434 FlyBaseID:FBgn0035452 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_008761976.1 Gene:Tnc / 116640 RGDID:621057 Length:2202 Species:Rattus norvegicus


Alignment Length:296 Identity:92/296 - (31%)
Similarity:142/296 - (47%) Gaps:43/296 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 GTFNESNLNLSSRLDALATLLASTALSVRSVQVEVANLSRAIRRQSRLIQGKGLRSTPGQQPIFY 254
            ||..|..:...:...:||.|..||..:.|     :..||.::|  |:|||            ..:
  Rat  1927 GTVKEVIVGPDTTSYSLADLSPSTHYTAR-----IQALSGSLR--SKLIQ------------TIF 1972

  Fly   255 GPSGLNGPTATRQLPSSCSYSFL---SNHGILKVQLT-PESESFYVSCD-----EDWTVILSRTS 310
            ...||..|     .|..||.:.|   :..|:..:.:. .::::..|.||     ..|.|.|.|.:
  Rat  1973 TTIGLLYP-----FPRDCSQAMLNGDTTSGLYTIYINGDKTQALEVYCDMTSDGGGWIVFLRRKN 2032

  Fly   311 DDVNFERGWLDYRDGFGNLAGDFFIGLNKLHALTSSALHELRIVMEDFSGNVAYAGYSLFAIGSE 375
            ...:|.|.|..|..|||:...:|::||:.|..:|:...:|||:.::| .|..|||.|..|::|..
  Rat  2033 GREDFYRNWKAYAAGFGDRREEFWLGLDNLSKITAQGQYELRVDLQD-HGESAYAVYDRFSVGDA 2096

  Fly   376 KELYPLVLLGKFQDNLTPSAGDSLSYHAGAKFSTVDQDNDNCLECNCALRHKGAGWFNNCAKSNL 440
            |..|.|.:.|     .:.:||||::||.|..|||.|:|.|:.: .||||.:|||.|:.||.:.||
  Rat  2097 KSRYKLKVEG-----YSGTAGDSMNYHNGRSFSTYDKDTDSAI-TNCALSYKGAFWYKNCHRVNL 2155

  Fly   441 FGEYTTQNQPGETGIWWDTFSG-QNSLKRVRWMIRP 475
            .|.|...|.  ..|:.|..:.| :.|::.....:||
  Rat  2156 MGRYGDNNH--SQGVNWFHWKGHEYSIQFAEMKLRP 2189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10359NP_001137882.1 FReD 267..476 CDD:238040 73/219 (33%)
TncXP_008761976.1 EGF_Tenascin 190..217 CDD:480934
EGF_Tenascin 252..280 CDD:480934
EGF_Tenascin 284..311 CDD:480934
EGF_Tenascin 315..341 CDD:480934
EGF_2 350..372 CDD:400365
EGF_2 380..403 CDD:400365
EGF_Tenascin 408..435 CDD:480934
EGF_Tenascin 439..466 CDD:480934
EGF_Tenascin 470..496 CDD:480934
EGF_Tenascin 501..528 CDD:480934
EGF_2 535..558 CDD:400365
EGF_Tenascin 563..589 CDD:480934
EGF_Tenascin 594..621 CDD:480934
FN3 624..710 CDD:238020
fn3 713..793 CDD:394996
FN3 <822..1234 CDD:442628
fn3 1257..1336 CDD:394996
fn3 1348..1417 CDD:394996
fn3 1437..1509 CDD:394996
fn3 1534..1606 CDD:394996
fn3 1622..1702 CDD:394996
FN3 <1719..>1958 CDD:442628 9/35 (26%)
fn3 1889..1961 CDD:394996 10/38 (26%)
Fibrinogen_C 1981..2190 CDD:395095 73/218 (33%)
Blue background indicates that the domain is not in the aligned region.

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