DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10359 and Fcnb

DIOPT Version :10

Sequence 1:NP_001137882.1 Gene:CG10359 / 38434 FlyBaseID:FBgn0035452 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_446086.1 Gene:Fcnb / 114091 RGDID:621222 Length:319 Species:Rattus norvegicus


Alignment Length:240 Identity:91/240 - (37%)
Similarity:124/240 - (51%) Gaps:22/240 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 KGLRSTPGQQPIFYGPSG--LNGPTATRQLPSSCSYSFLSNHGILKVQLTPESESFYVSCDED-- 301
            ||:|...|..    |||.  ..||...::|.:. .| ||:  |...:.| |:.....|.||.|  
  Rat    89 KGVRGEKGDT----GPSQSCATGPRTCKELLTR-GY-FLT--GWYTIYL-PDCRPLTVLCDMDTD 144

  Fly   302 ---WTVILSRTSDDVNFERGWLDYRDGFGNLAGDFFIGLNKLHALTSSALHELRIVMEDFSGNVA 363
               |||...|....|:|.|.|..|:.|||:..|:|::|.:.:||||:...:|||:.:.||.||..
  Rat   145 GGGWTVFQRRIDGTVDFFRDWTSYKQGFGSQLGEFWLGNDNIHALTTQGTNELRVDLADFDGNHD 209

  Fly   364 YAGYSLFAIGSEKELYPLVLLGKFQDNLTPSAGDSLSYHAGAKFSTVDQDNDNCLECNCALRHKG 428
            :|.||.|.|..|.|.|.|: ||.|   |...|||||:......|||.|||||.. ..|||:|:.|
  Rat   210 FAKYSSFQIQGEAEKYKLI-LGNF---LGGGAGDSLTSQNNMLFSTKDQDNDQG-SSNCAVRYHG 269

  Fly   429 AGWFNNCAKSNLFGEYTT-QNQPGETGIWWDTFSGQNSLKRVRWM 472
            |.|:::|..|||.|.|.. .::....|:.|.::.|.|...:|..|
  Rat   270 AWWYSDCHTSNLNGLYLRGLHKSYANGVNWKSWKGYNYSYKVSEM 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10359NP_001137882.1 FReD 267..476 CDD:238040 82/212 (39%)
FcnbNP_446086.1 Collagen 45..100 CDD:460189 4/14 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..106 7/20 (35%)
FReD 108..317 CDD:238040 83/217 (38%)

Return to query results.
Submit another query.