DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10359 and Fgb

DIOPT Version :9

Sequence 1:NP_001137882.1 Gene:CG10359 / 38434 FlyBaseID:FBgn0035452 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_862897.1 Gene:Fgb / 110135 MGIID:99501 Length:481 Species:Mus musculus


Alignment Length:518 Identity:112/518 - (21%)
Similarity:186/518 - (35%) Gaps:155/518 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EVPGVTQAPP---------LPPRNLRNNQTRSRIPNNFRSIATPPIAPRCDYKELMTNLH--DRV 80
            |.|.:..|||         .|.:...|.:...|         .||.|..|        ||  ..:
Mouse    45 EPPSLRPAPPPISGGGYRARPAKATANQKKVER---------RPPDAGGC--------LHADTDM 92

  Fly    81 GIL---------VTLDEDQ--RHRLEVIDKKLDQLVESSSARMESMKAQQLDFLHRLDSFEHIQR 134
            |:|         ..|::::  :..:..::..:..:.::||.                 :|:::..
Mouse    93 GVLCPTGCTLQQTLLNQERPIKSSIAELNNNIQSVSDTSSV-----------------TFQYLTL 140

  Fly   135 LSRNTLDELKGETDQVFGPRNV-RELKHKLRNRKKMKDISRTVRDVSQEQYPSSGIGTFNESNLN 198
            |.    |..|.:..||....|| .|....|.:::..  |..||.|                   |
Mouse   141 LK----DMWKKKQAQVKENENVINEYSSILEDQRLY--IDETVND-------------------N 180

  Fly   199 LSSRLDALATLLASTALSVR------SVQVEVANLSRAIRRQSRLIQGKGLRSTPGQQPIFYGPS 257
            :...|..|.::|......::      |.|:|.......:.....::.||..     ::.|..|  
Mouse   181 IPLNLRVLRSILEDLRSKIQKLESDISAQMEYCRTPCTVSCNIPVVSGKEC-----EEIIRKG-- 238

  Fly   258 GLNGPTATRQLPSSCSYSFLSNHGILKVQLTPESESFYVSCD-----EDWTVILSRTSDDVNFER 317
               |.|:...|                :|.....:.:.|.||     ..||||.:|....|:|.|
Mouse   239 ---GETSEMYL----------------IQPDTSIKPYRVYCDMKTENGGWTVIQNRQDGSVDFGR 284

  Fly   318 GWLDYRDGFGNLA------------GDFFIGLNKLHALTSSALHELRIVMEDFSGNVAYAGYSLF 370
            .|..|:.||||:|            |::::|.:|:..||.....||.|.|||:.|:...|.|..|
Mouse   285 KWDPYKKGFGNIATNEDAKKYCGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKVKAHYGGF 349

  Fly   371 AIGSEKELYPLVLLGKFQ--------DNLTPSAGD--SLSYHAGAKFSTVDQDNDNCLECN---- 421
            .:.:|...|. |.:.|::        |..:...|:  :::.|.|..|||.|:|||..:..:    
Mouse   350 TVQNEASKYQ-VSVNKYKGTAGNALMDGASQLVGENRTMTIHNGMFFSTYDRDNDGWVTTDPRKQ 413

  Fly   422 CALRHKGAGWFNNCAKSNLFGEY--------TTQNQPGETGIWWDTFSGQ-NSLKRVRWMIRP 475
            |:....|..|:|.|..:|..|.|        .......:.|:.|..:.|. .|::|:...|||
Mouse   414 CSKEDGGGWWYNRCHAANPNGRYYWGGLYSWDMSKHGTDDGVVWMNWKGSWYSMRRMSMKIRP 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10359NP_001137882.1 FReD 267..476 CDD:238040 66/249 (27%)
FgbNP_862897.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..81 9/44 (20%)
Beta-chain polymerization, binding distal domain of another fibrin. /evidence=ECO:0000250 35..37
Fib_alpha 82..224 CDD:285864 30/191 (16%)
FReD 227..476 CDD:294064 70/275 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X25
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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