DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10359 and LOC100485312

DIOPT Version :10

Sequence 1:NP_001137882.1 Gene:CG10359 / 38434 FlyBaseID:FBgn0035452 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_031759838.1 Gene:LOC100485312 / 100485312 XenbaseID:XB-GENE-29077735 Length:308 Species:Xenopus tropicalis


Alignment Length:309 Identity:93/309 - (30%)
Similarity:130/309 - (42%) Gaps:45/309 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 LDALATLLASTALSVRSVQVE-------VANLSRAIRRQSRLIQG-------KGLRSTPG----- 248
            :..:.|||.|.|....|.|..       ..|....||..:.|::|       :||:..||     
 Frog     8 VSVMETLLGSIATDSLSFQERPFAAPDPTPNDYYRIRPCTELLKGDPGIPGPQGLKGDPGINGTN 72

  Fly   249 ---QQPIFYGPSGLNGPTATRQLPSSCSY-----SFLSNHGILK---VQLTPES-ESFYVSCDED 301
               ..|   |..|..||...:. .|:.||     ..|.:.|::.   ..:.|:. ....|.||.|
 Frog    73 GEKGDP---GEMGAQGPKGEKG-TSNLSYVARNCKELLDQGVVMSGWYTIYPDGMVPLQVLCDMD 133

  Fly   302 -----WTVILSRTSDDVNFERGWLDYRDGFGNLAGDFFIGLNKLHALTSSALHELRIVMEDFSGN 361
                 |.|...|....|:|..||..|:.|||:...:|::|.:.|...|||...|:|:.|..:...
 Frog   134 TDGGGWIVFQRRYDGSVDFYLGWDSYKRGFGSRLTEFWLGNDNLSNFTSSGTWEMRVDMRYYDNI 198

  Fly   362 VAYAGYSLFAIGSEKELYPLVLLGKFQDNLTPSAGDSLSYHAGAKFSTVDQDNDNCLECNCALRH 426
            ..||.||.|.:..|.:.|.|: :|.:   :...||||:||...:||:|.|.|||:....|||...
 Frog   199 QHYAKYSSFRVLPESDSYTLI-IGPY---VAGDAGDSMSYSNYSKFTTKDWDNDDMPGDNCADYG 259

  Fly   427 KGAGWFNNCAKSNLFGEYTTQNQPGETGIWWDTFSGQNSLKRVRWMIRP 475
            .||.|:..|..:||.|.|..|....|...|. |.....|||.....:||
 Frog   260 HGAWWYKYCYLANLNGLYQEQGYNTECNCWL-TLGSYYSLKFSEMKMRP 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10359NP_001137882.1 FReD 267..476 CDD:238040 72/223 (32%)
LOC100485312XP_031759838.1 Collagen 52..91 CDD:460189 10/41 (24%)
FReD 100..307 CDD:238040 67/211 (32%)

Return to query results.
Submit another query.