DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10359 and fibcd1a

DIOPT Version :9

Sequence 1:NP_001137882.1 Gene:CG10359 / 38434 FlyBaseID:FBgn0035452 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_005166963.1 Gene:fibcd1a / 100151577 ZFINID:ZDB-GENE-081105-148 Length:464 Species:Danio rerio


Alignment Length:492 Identity:148/492 - (30%)
Similarity:214/492 - (43%) Gaps:93/492 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VMVLAAICGFGTGSVL-----EVPGVTQAPPLPPRNLRNNQTRSRIPNNFRSIATPPIAPRC-DY 69
            |.||.|:.  .||.:|     :.|.....|||...|.........|.....|.....|.|.| ||
Zfish    39 VAVLLAVT--VTGIILLMNHYQAPSGPDGPPLISTNQDEGNALVTIERGDGSRINIFIDPNCPDY 101

  Fly    70 KELMTNLHDRVGILVTLDEDQRHRLEVIDKKLDQLVESSSARMESMKAQQLDFLHRLDSFEHIQR 134
            .....                  |||.:...|...:......::|:|.|....|.:|  .|.:.:
Zfish   102 NNNFL------------------RLEGVQTSLLHSLTDHDTDLKSVKGQDRALLVKL--AEEVAK 146

  Fly   135 LSRNTLDELKGETDQVFGPRNVRELKHKLRNRKKMKDISRTVRDVSQEQYPSSGIGTFNESNLNL 199
            ||.:. .:||.|.:.:               |:...:|.:.:..:..||  ...|...:||.:|:
Zfish   147 LSAHA-SQLKMEYNAL---------------RQGQGNIGQELSTLQTEQ--GRLIQLLSESQINM 193

  Fly   200 SSRLDALATLLASTALSVRSVQVEVANLSRAIRRQSRL---IQGKGLRSTPGQQPIFYGPSGLNG 261
            ...::::     |.|||  |:|.|..|:      :|||   :|...:||.        .|.|...
Zfish   194 VKVVNSV-----SDALS--SMQKENGNI------KSRLKADLQRAPVRSV--------RPKGCAA 237

  Fly   262 PTATRQLPSSCSYSFLSNH---GILKVQLTPESESFYVSCD-----EDWTVILSRTSDDVNFERG 318
            ...:|  |..||..:.|..   ||..|..|.....|.|.||     ..||||..|....|||.|.
Zfish   238 GEGSR--PRDCSDIYASGQREDGIYSVFPTHYPAGFQVFCDMTTDGGGWTVIQRREDGSVNFFRD 300

  Fly   319 WLDYRDGFGNLAGDFFIGLNKLHALTSSALHELRIVMEDFSGNVAYA-----GYSLFAIGSEKEL 378
            |..||:|||.:.|:.::|:.::||||..|.:||||.:|||..:.::|     |..||::..:::.
Zfish   301 WEAYREGFGKITGEHWLGMKRIHALTIQANYELRIDLEDFENSTSFAQYGSFGVGLFSVDPDEDG 365

  Fly   379 YPLVLLGKFQDNLTPSAGDSLSYHAGAKFSTVDQDNDNCLECNCALRHKGAGWFNNCAKSNLFGE 443
            |||.:.     :.:.:|||||..|.|.||:|.|:|||:. |.|||..:.||.|:.||..|||.|:
Zfish   366 YPLSIA-----DYSGTAGDSLLKHNGMKFTTKDKDNDHS-ENNCASFYHGAWWYRNCHTSNLNGQ 424

  Fly   444 YTT-QNQPGETGIWWDTFSG-QNSLKRVRWMIRPISE 478
            |.. |:.....||.|.:::| |.|||.....|||..|
Zfish   425 YLRGQHTSYADGIEWSSWTGWQYSLKFTEMKIRPTKE 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10359NP_001137882.1 FReD 267..476 CDD:238040 87/223 (39%)
fibcd1aXP_005166963.1 FReD 243..458 CDD:238040 86/220 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

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