DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycJ and CLN2

DIOPT Version :9

Sequence 1:NP_523903.1 Gene:CycJ / 38428 FlyBaseID:FBgn0010317 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_015067.1 Gene:CLN2 / 855819 SGDID:S000006177 Length:545 Species:Saccharomyces cerevisiae


Alignment Length:427 Identity:78/427 - (18%)
Similarity:148/427 - (34%) Gaps:99/427 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ADVERLAKTHWLTDYARDIFLTMREQELSRRP---LFYLSPQLN---ERRRMLQLLKLATSAHKL 83
            ::.|.|:....|.:|.::|...:..|....:|   |....|::|   .|..::..|...:...::
Yeast    26 SNAELLSHFEMLQEYHQEISTNVIAQSCKFKPNPKLIDQQPEMNPVETRSNIITFLFELSVVTRV 90

  Fly    84 SRCALHLAVYYMDRFVDYYKIRPDKLLLVAITCLHIAAQI---------------------ENTD 127
            :......:|...||:.....:..|:..||..|||.:||:.                     .|..
Yeast    91 TNGIFFHSVRLYDRYCSKRIVLRDQAKLVVATCLWLAAKTWGGCNHIINNVVIPTGGRFYGPNPR 155

  Fly   128 AFIPRYSEMNRLVKNAYTAFE--YKAVERKILCFLNFELIRPTTASFV-----------ELF--A 177
            |.|||.||:.....:.....|  :..:||.||..||:.:..|....:|           ||:  .
Yeast   156 ARIPRLSELVHYCGDGQVFDESMFLQMERHILDTLNWNIYEPMINDYVLNVDENCLMQYELYENQ 220

  Fly   178 CSFLTRSDFKNYIEMLDEYERNHHTQPYQRYISFEEMLSILAQLLLRMADYTLYISRFANDLPSL 242
            .::..:...|...::..:.:.....:|||.....||.|.:..: |:.:..:.:.:|.:..||...
Yeast   221 VTYDKQCSEKRQSQLSQDSDATVDERPYQNEEEEEEDLKLKIK-LINLKKFLIDVSAWQYDLLRY 284

  Fly   243 ----LAAACIAAVRQVSGVRRWSEYLVGLTS-------------------------YTEAN-VEP 277
                ::....:.:.|.:........:..:||                         |...| |.|
Yeast   285 ELFEVSHGIFSIINQFTNQDHGPFLMTPMTSESKNGEILSTLMNGIVSIPNSLMEVYKTVNGVLP 349

  Fly   278 YMNVLTDYYYYHVIQTDYGSPSVQTNQSLASPDSGFEESFTENTNLVVSDEVVTVETYNIITVQL 342
            ::|.:.:|:.           .:|....:||       :...:..|.:|....:.|..|..::  
Yeast   350 FINQVKEYHL-----------DLQRKLQIAS-------NLNISRKLTISTPSCSFENSNSTSI-- 394

  Fly   343 QDPSPHSSTFLPKEQTNLK----RSRFEDDTENQHPL 375
              |||.||:.......|:.    .|.|..:.|...|:
Yeast   395 --PSPASSSQSHTPMRNMSSLSDNSVFSRNMEQSSPI 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycJNP_523903.1 Cyclin_N 42..164 CDD:278560 33/150 (22%)
Cyclin_C <225..>286 CDD:281044 11/90 (12%)
CLN2NP_015067.1 COG5024 33..524 CDD:227357 76/420 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10177
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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