Protein Alignment CycJ and CLN3

DIOPT Version :9

• Sequence 1: NP_523903.1
• Gene: CycJ / 38428
• FlyBaseID: FBgn0010317
• Length: 386
• Species: Drosophila melanogaster
• Sequence 2: NP_009360.1
• Gene: CLN3 / 851191
• SGDID: S000000038
• Length: 580
• Species: Saccharomyces cerevisiae
• Alignment Length: 420
• Identity: 80/420 - (19%)
• Similarity: 153/420 - (36%)
• Gaps: 92/420 - (21%)

  Fly    27 VERLAKTHW--LTDYARDIFLTMREQELSRRPLFYLS-----PQLNERRRML--QLLKLATSAHK 82
            |:|..:.|.  :::|..|..........:.|||:.|:     ||:|.:.|.|  ..:....:...
Yeast    59 VKRELQAHHSAISEYNNDQLDHYFRLSHTERPLYNLTNFNSQPQVNPKMRFLIFDFIMYCHTRLN 123

  Fly    83 LSRCALHLAVYYMDRFVDYYKIRPDKLLLVAITCLHIAAQIENTDAFIPRYSEMNRLVKNAYTAF 147
            ||...|.|....:|::...:.|:.....|:::|.|.|:::..::...:.....:..|..|.|:..
Yeast   124 LSTSTLFLTFTILDKYSSRFIIKSYNYQLLSLTALWISSKFWDSKNRMATLKVLQNLCCNQYSIK 188

  Fly   148 EYKAVERKILCFLNFELIRPTT-ASFVELFACSFLTRSDFKNYIEMLDEYERNHHTQPYQRYISF 211
            ::..:|..:...|::.:.:..| .|::::|.  |.:.|.....:.:         :.|.:.:|
Yeast   189 QFTTMEMHLFKSLDWSICQSATFDSYIDIFL--FQSTSPLSPGVVL---------SAPLEAFI-- 240

  Fly   212 EEMLSIL---------------------------AQLLLRMADYTLYISRFANDLPSLLAAACIA 249
            ::.|::|                           |.:|..:|.:.|.:| |..| .||:|...|.
Yeast   241 QQKLALLNNAAGTAINKSSSSQGPSLNINEIKLGAIMLCELASFNLELS-FKYD-RSLIALGAIN 303

  Fly   250 AVR---QVSGVRRWSEYLVGLTSY---TEANVEPYMNVLTDYYYYHVIQTDYGS-PSVQTNQSLA 307
            .::   .......|....:.|...   .:..:....|.|.|      |..|..| ||...::.|.
Yeast   304 LIKLSLNYYNSNLWENINLALEENCQDLDIKLSEISNTLLD------IAMDQNSFPSSFKSKYLN 362

  Fly   308 SPDSGFEESFTEN-TNLVV---------SDEVVTVETYNIITVQLQDPSP----HSSTFLPKEQT 358
            |..:...:|..:. .|..:         |.|:.|:  ||.|..|..|...    :|:...||..|
Yeast   363 SNKTSLAKSLLDALQNYCIQLKLEEFYRSQELETM--YNTIFAQSFDSDSLTCVYSNATTPKSAT 425

  Fly   359 --NLKRSRFEDDTENQHPLKHAKVESVAKD 386
              :.....|.|         |..:..:.||
Yeast   426 VSSAATDYFSD---------HTHLRRLTKD 446

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycJ	NP_523903.1	Cyclin_N	42..164	CDD:278560	25/128 (20%)
		Cyclin_C	<225..>286	CDD:281044	14/66 (21%)
CLN3	NP_009360.1	COG5024	35..576	CDD:227357	80/420 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5024
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10177
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.000