Protein Alignment CycJ and CYCD3;2

DIOPT Version :10

• Sequence 1: NP_523903.1
• Gene: CycJ / 38428
• FlyBaseID: FBgn0010317
• Length: 386
• Species: Drosophila melanogaster
• Sequence 2: NP_001331659.1
• Gene: CYCD3;2 / 836861
• AraportID: AT5G67260
• Length: 404
• Species: Arabidopsis thaliana
• Alignment Length: 347
• Identity: 77/347 - (22%)
• Similarity: 127/347 - (36%)
• Gaps: 87/347 - (25%)

  Fly    42 DIFLTMREQELSRRPLFYLSPQLNE------RRRMLQLLKLATSAHKLSRCALHLAVYYMDRFVD 100
            |..|::..:|....|.|  ..|:.:      |:..|..:....|.:..:.....|||.|.|||:.
plant    67 DEILSLISKENETNPCF--GEQILDGFLVSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMT 129

  Fly   101 YYKIRPDK---LLLVAITCLHIAAQIENTDAFIPRYSEMNRLVKNAYTAFEYKAVERK---ILCF 159
            ..|::.||   ..|||:..|.:||::|...  :|...::.  |:.|...||.|.::|.   ||..
plant   130 SIKLQTDKPWMSQLVAVASLSLAAKVEEIQ--VPLLLDLQ--VEEARYLFEAKTIQRMELLILST 190

  Fly   160 LNFELIRPTTASF----VELFACSFLTRSDFKNYIEMLDEYERNHHTQPYQRYISFEEMLSILAQ 220
            |.:.:...|..||    :..|...:..:.||....|.|                    ::|::|.
plant   191 LQWRMHPVTPISFFDHIIRRFGSKWHQQLDFCRKCERL--------------------LISVIAD 235

  Fly   221 LLLRMADYTLYISRFANDLPSLLAAACIAAVRQVSGVRRWSEYLVGLTSYTEANVEPYMNVLTDY 285
                        :||....||:||.|.:..|.:........||...:|:..:.|.|. :|...:.
plant   236 ------------TRFMRYFPSVLATAIMILVFEELKPCDEVEYQSQITTLLKVNQEK-VNECYEL 287

  Fly   286 YYYHVIQTDYGSPSVQTNQSLASPDS-----GFEESFTENTNLVVSDEVVTVETYNIITVQLQDP 345
            ...|       :||.:...:|...||     .|::|...:.|         |.|...::.....|
plant   288 LLEH-------NPSKKRMMNLVDQDSPSGVLDFDDSSNSSWN---------VSTTASVSSSSSSP 336

  Fly   346 SPHSSTFLPKEQTNLKRSRFED 367
            .|           .|||.|.::
plant   337 EP-----------LLKRRRVQE 347

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycJ	NP_523903.1	CYCLIN_CCNJ-like_rpt1	61..162	CDD:410231	31/112 (28%)
		CYCLIN_CCNJ-like_rpt2	167..282	CDD:410232	24/118 (20%)
CYCD3;2	NP_001331659.1	CYCLIN_AtCycD-like_rpt1	95..193	CDD:410246	30/101 (30%)
		CYCLIN_AtCycD-like_rpt2	198..288	CDD:410247	24/122 (20%)