Protein Alignment CycJ and CYC3B

DIOPT Version :10

• Sequence 1: NP_523903.1
• Gene: CycJ / 38428
• FlyBaseID: FBgn0010317
• Length: 386
• Species: Drosophila melanogaster
• Sequence 2: NP_568248.2
• Gene: CYC3B / 831001
• AraportID: AT5G11300
• Length: 436
• Species: Arabidopsis thaliana
• Alignment Length: 290
• Identity: 74/290 - (25%)
• Similarity: 122/290 - (42%)
• Gaps: 53/290 - (18%)

  Fly    39 YARDIFLTMREQELSRRPLFY--------LSPQLNERRRMLQLLKLATSAHKLSRCALHLAVYYM 95
            ||.||:..:...||.:|||..        :.|.:  |:.::..|...:..:||....|:|.|..:
plant   172 YAADIYDNIHVAELQQRPLANYMELVQRDIDPDM--RKILIDWLVEVSDDYKLVPDTLYLTVNLI 234

  Fly    96 DRFVDYYKIRPDKLLLVAITCLHIAAQIENTDAFIPRYSEMNRLVKNAYTAFEYKAVERKILCFL 160
            |||:....|...:|.|:.::|:.||::.|...|  |...|...:..|.||..|..::|.:||.|:
plant   235 DRFLSNSYIERQRLQLLGVSCMLIASKYEELSA--PGVEEFCFITANTYTRPEVLSMEIQILNFV 297

  Fly   161 NFELIRPTTASFVELFACSFLTRSDFK-NYIEMLDEYERNHHTQPYQRYISFEEMLSILAQLLLR 224
            :|.|..|||.:|:..|..:  .::.:| .:||:  ||..|:
plant   298 HFRLSVPTTKTFLRRFIKA--AQASYKVPFIEL--EYLANY------------------------ 334

  Fly   225 MADYTLYISRFANDLPSLLAAACIAAVR----QVSGVRRWSEYLVGLTSYTEANVEPYMNVLTDY 285
            :|:.||....|...||||:||:.:...|    |..  ..|:..|...|.|..|.::..:..:.|.
plant   335 LAELTLVEYSFLRFLPSLIAASAVFLARWTLDQTD--HPWNPTLQHYTRYEVAELKNTVLAMEDL 397

  Fly   286 YY------YHVIQTDYGSPSVQTNQSLASP 309
            ..      ....:..|..|..::...|.||
plant   398 QLNTSGCTLAATREKYNQPKFKSVAKLTSP 427

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycJ	NP_523903.1	CYCLIN_CCNJ-like_rpt1	61..162	CDD:410231	29/100 (29%)
		CYCLIN_CCNJ-like_rpt2	167..282	CDD:410232	28/119 (24%)
CYC3B	NP_568248.2	CYCLIN_AtCycA_like_rpt1	165..300	CDD:410265	38/131 (29%)
		CYCLIN_AtCycA-like_rpt2	304..418	CDD:410210	31/143 (22%)