Protein Alignment CycJ and CYCD4;2

DIOPT Version :10

• Sequence 1: NP_523903.1
• Gene: CycJ / 38428
• FlyBaseID: FBgn0010317
• Length: 386
• Species: Drosophila melanogaster
• Sequence 2: NP_196606.3
• Gene: CYCD4;2 / 830908
• AraportID: AT5G10440
• Length: 298
• Species: Arabidopsis thaliana
• Alignment Length: 193
• Identity: 47/193 - (24%)
• Similarity: 83/193 - (43%)
• Gaps: 36/193 - (18%)

  Fly    40 ARDIFLTMREQELSRRPL-FYLSP------QLNERRRMLQLLKLATSAHKLSRCALHLAVYYMDR 97
            :.:|...|.|:|....|. .||..      ..|.|.:.|..:..|....:.....:.||:.|:||
plant    35 SEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCICLAMNYLDR 99

  Fly    98 FVDYYKIRPDK---LLLVAITCLHIAAQIENTDAFIPRYSEMNRLVKNAYTAFEYKAVERKILCF 159
            |:..:.:...|   :.|:|:.||.:||:||.|:  :|...::.  |......||.|:|:|..|..
plant   100 FLSVHDLPSGKAWTVQLLAVACLSLAAKIEETN--VPELMQLQ--VGAPMFVFEAKSVQRMELLV 160

  Fly   160 LN---FELIRPTTASFVELFACSFLTRSDFKNYIEMLDEYERNHHTQPYQRYISFEEMLSILA 219
            ||   :.|...|..|:|..|             :..::.|::    :|:.|.::  ..|.::|
plant   161 LNVLRWRLRAVTPCSYVRYF-------------LSKINGYDQ----EPHSRLVT--RSLQVIA 204

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycJ	NP_523903.1	CYCLIN_CCNJ-like_rpt1	61..162	CDD:410231	30/112 (27%)
		CYCLIN_CCNJ-like_rpt2	167..282	CDD:410232	9/53 (17%)
CYCD4;2	NP_196606.3	CYCLIN_AtCycD-like_rpt1	68..166	CDD:410246	29/101 (29%)
		CYCLIN_AtCycD-like_rpt2	171..257	CDD:410247	9/53 (17%)