Protein Alignment CycJ and CYCB1;3

DIOPT Version :10

• Sequence 1: NP_523903.1
• Gene: CycJ / 38428
• FlyBaseID: FBgn0010317
• Length: 386
• Species: Drosophila melanogaster
• Sequence 2: NP_187759.2
• Gene: CYCB1;3 / 820325
• AraportID: AT3G11520
• Length: 414
• Species: Arabidopsis thaliana
• Alignment Length: 271
• Identity: 63/271 - (23%)
• Similarity: 122/271 - (45%)
• Gaps: 43/271 - (15%)

  Fly    13 VVDRKLKKTCPQADVERLAKTHWL--TDYARDIFLTMREQELSRRPLFYL--SPQLNERRRMLQL 73
            |:|.:.|......|::.:.|.:.|  .:|..|:::..:|.....:|..|:  .|:::|:.|.: |
plant   131 VLDARSKAASKTLDIDYVDKENDLAAVEYVEDMYIFYKEVVNESKPQMYMHTQPEIDEKMRSI-L 194

  Fly    74 LKLATSAH---KLSRCALHLAVYYMDRFVDYYKIRPDKLLLVAITCLHIAAQIENTDAFIPRYSE 135
            :......|   .||...|:|.|..:|||:....:...:|.||.::.|.||::.|  :.:.|:.::
plant   195 IDWLVEVHVKFDLSPETLYLTVNIIDRFLSLKTVPRRELQLVGVSALLIASKYE--EIWPPQVND 257

  Fly   136 MNRLVKNAYTAFEYKAVERKILCFLNFELIRPTTASFVELFACSFLTRSDFKNYIEMLDEYERNH 200
            :..:..|:|.:.:...:|:.||..|.:.|..||...|:..|..:  :.||.|
plant   258 LVYVTDNSYNSRQILVMEKTILGNLEWYLTVPTQYVFLVRFIKA--SGSDQK------------- 307

  Fly   201 HTQPYQRYISFEEMLSILAQLLLRMADYTLYISRFANDLPSLLAAACIAAVR-QVSGVRRWSEYL 264
                      .|.::..||:|.|...|..::       .||:|||:.:...| .::....|::.|
plant   308 ----------LENLVHFLAELGLMHHDSLMF-------CPSMLAASAVYTARCCLNKTPTWTDTL 355

  Fly   265 VGLTSYTEANV 275
            ...|.|:|:.:
plant   356 KFHTGYSESQL 366

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycJ	NP_523903.1	CYCLIN_CCNJ-like_rpt1	61..162	CDD:410231	27/103 (26%)
		CYCLIN_CCNJ-like_rpt2	167..282	CDD:410232	24/110 (22%)
CYCB1;3	NP_187759.2	CYCLIN_AtCycB-like_rpt1	139..284	CDD:410270	35/147 (24%)
		CYCLIN_AtCycB-like_rpt2	289..405	CDD:410215	24/110 (22%)