Protein Alignment CycJ and ccndx

DIOPT Version :10

• Sequence 1: NP_523903.1
• Gene: CycJ / 38428
• FlyBaseID: FBgn0010317
• Length: 386
• Species: Drosophila melanogaster
• Sequence 2: NP_001165869.1
• Gene: ccndx / 567411
• ZFINID: ZDB-GENE-080917-47
• Length: 297
• Species: Danio rerio
• Alignment Length: 219
• Identity: 49/219 - (22%)
• Similarity: 83/219 - (37%)
• Gaps: 60/219 - (27%)

  Fly    59 YLSPQLNERRRMLQLLKLATSAHKLSRC---ALHLAVYYMDRFVDYYKIRPDKLLLVAITCLHIA 120
            |:|....|.:|..:|.|..........|   ...|||..:||::......|.....:|..|:.:|
Zfish    51 YISLVQREPQRREELAKWTMEVCCECDCDESVFPLAVSLLDRYLSATLSLPVSPSCLAAACILLA 115

  Fly   121 AQIENTDAFIPRYSEMNRLVKNAYT---AFEY-------KAVERKILCFLNFELIRPTTASFVEL 175
            :::..:|..            :|.|   |.||       :.:||.:|..|.::::..|...|:.|
Zfish   116 SKVTESDTV------------SADTLCAAAEYDFLSANLREMERVVLATLRWDVLAVTPQDFIPL 168

  Fly   176 FACSFLTRSDFKNYIEMLDEY-ERNHHTQPYQRYISFEEMLSILAQLLLRMADYTLYI----SRF 235
            |             :..|.|. :.:.||..:             ...:.|..|..:.:    |||
Zfish   169 F-------------LRTLGELRDGDGHTGDF-------------LTTMRRHGDTLVAMCVCDSRF 207

  Fly   236 ANDLPSLLAAACI-AAVRQVSGVR 258
            ....|||:|||.: :|:|   |:|
Zfish   208 LGTPPSLVAAAALNSALR---GLR 228

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycJ	NP_523903.1	CYCLIN_CCNJ-like_rpt1	61..162	CDD:410231	25/113 (22%)
		CYCLIN_CCNJ-like_rpt2	167..282	CDD:410232	23/98 (23%)
ccndx	NP_001165869.1	CYCLIN_SF	16..156	CDD:477360	26/116 (22%)
		CYCLIN_CCND_rpt2	161..265	CDD:410220	23/97 (24%)