Protein Alignment CycJ and Ccne2

DIOPT Version :9

• Sequence 1: NP_523903.1
• Gene: CycJ / 38428
• FlyBaseID: FBgn0010317
• Length: 386
• Species: Drosophila melanogaster
• Sequence 2: NP_001102126.1
• Gene: Ccne2 / 362485
• RGDID: 1307783
• Length: 405
• Species: Rattus norvegicus
• Alignment Length: 291
• Identity: 64/291 - (21%)
• Similarity: 117/291 - (40%)
• Gaps: 63/291 - (21%)

  Fly    60 LSPQLNERRRMLQLLKLATSAHKLSRCALHLAVYYMDRFVDYYK-IRPDKLLLVAITCLHIAAQI 123
            |.||:  |..:|..|......:.|.|...:||..:.|||:...| :..:.|.|:.||.|.||:::
  Rat   138 LEPQM--RSILLDWLLEVCEVYTLHRETFYLAQDFFDRFMLTQKDVNKNMLQLIGITSLFIASKL 200

  Fly   124 ENTDAFIPRYSEMNRLVKNAYTAFEYKAVERKILCFLNFELIRPTTASFVELFACSFLTRSDFKN 188
            |  :.:.|:..|...:...|.:..:...:|..||..|.:||...|..|::.|    ||.....|:
  Rat   201 E--EIYAPKLQEFAYVTDGACSEVDILKMELNILKALKWELCPVTVISWLNL----FLQVDAVKD 259

  Fly   189 YIE-MLDEYERNHHTQPYQRYISFEEMLSILAQLLLRMADYTLYISRFANDLPSLLAAAC----- 247
            ..: :|.:|.:       :.:|...::|. |..|.:...::...|          ||||.
  Rat   260 IPKVLLPQYSQ-------ETFIQIAQLLD-LCILAIDSLEFQYRI----------LAAAALCHFT 306

  Fly   248 -IAAVRQVSGVRRWS------EYLVGLTSYTEA------------------NVEP---YMNVLTD 284
             |..|::.||: .|.      :::|...|..::                  |::.   |:.:|.:
  Rat   307 SIEVVKKASGL-EWDDISECVDWMVPFVSVVKSVSPVKLKTFKKIPMEDRHNIQTHTNYLALLNE 370

  Fly   285 YYYYHVIQTDYGSPSVQTNQSLASPDSGFEE 315
            ..|.::.:.. |..|...|..:.:|....|:
  Rat   371 VNYVNIFRKG-GQLSPVCNGGIMTPPKSTEK 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycJ	NP_523903.1	Cyclin_N	42..164	CDD:278560	29/104 (28%)
		Cyclin_C	<225..>286	CDD:281044	15/93 (16%)
Ccne2	NP_001102126.1	CYCLIN_SF	101..237	CDD:424085	29/102 (28%)
		CYCLIN_SF	241..329	CDD:424085	22/110 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5024
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D993640at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820