Protein Alignment CycJ and CycD

DIOPT Version :9

• Sequence 1: NP_523903.1
• Gene: CycJ / 38428
• FlyBaseID: FBgn0010317
• Length: 386
• Species: Drosophila melanogaster
• Sequence 2: NP_523355.2
• Gene: CycD / 32551
• FlyBaseID: FBgn0010315
• Length: 477
• Species: Drosophila melanogaster
• Alignment Length: 278
• Identity: 60/278 - (21%)
• Similarity: 101/278 - (36%)
• Gaps: 83/278 - (29%)

  Fly    62 PQLNERRRMLQLLKLATSAHK------------------------LSRCA--------LHLAVYY 94
            |.|...|.:...||:....||                        :..||        :.||:.|
  Fly   145 PTLYSDRCLENFLKVEEKHHKIPDTYFSIQKDITPPMRKIVAEWMMEVCAEENCQEEVVLLALNY 209

  Fly    95 MDRFVDYYKIRPDKLLLVAITCLHIAAQIE-------NTDAFIPRYSEMNRLVKNAYTAFEYKAV 152
            ||||:....:|..:|.::|..||.:|:::.       :.|..:. |:: |.:.|:....:|...:
  Fly   210 MDRFLSSKSVRKTQLQILAAACLLLASKLREPSCRALSVDLLVV-YTD-NSIYKDDLIKWELYVL 272

  Fly   153 ERKILCFLNFELIRPTTASFVELFACSFLTRSDFKNYIEMLDEYERNHHTQPYQRYISFEEMLSI 217
            .|     |.::|...|...|:||........|  ||:.::.....|.|
  Fly   273 SR-----LGWDLSSVTPLDFLELLMMRLPIGS--KNFPDINIGKVRGH----------------- 313

  Fly   218 LAQLLLRMADYTLYISRFANDLPSLLAAACIAAVRQVSGVRRWS-----------EYLVGLTSYT 271
             ||..:.:|...   .:||....|.:||:.|||  .::|: :|.           ..:..|||..
  Fly   314 -AQAFISLAAKE---HKFAKFSASTIAASSIAA--SMNGL-KWHLRSGHNLHFLLSLMTDLTSVE 371

  Fly   272 EANVEPYMNVLTDYYYYH 289
            :|.|...|..:.|.:..|
  Fly   372 QAQVRDCMLHMEDIFKEH 389

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycJ	NP_523903.1	Cyclin_N	42..164	CDD:278560	29/140 (21%)
		Cyclin_C	<225..>286	CDD:281044	18/71 (25%)
CycD	NP_523355.2	Cyclin_N	155..280	CDD:278560	26/131 (20%)
		Cyclin_C	282..>392	CDD:281044	30/134 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10177
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010