Protein Alignment CycJ and Ccnj

DIOPT Version :9

• Sequence 1: NP_523903.1
• Gene: CycJ / 38428
• FlyBaseID: FBgn0010317
• Length: 386
• Species: Drosophila melanogaster
• Sequence 2: NP_001099839.1
• Gene: Ccnj / 294053
• RGDID: 1306399
• Length: 379
• Species: Rattus norvegicus
• Alignment Length: 247
• Identity: 72/247 - (29%)
• Similarity: 111/247 - (44%)
• Gaps: 30/247 - (12%)

  Fly    35 WLTDYARDIFLTMREQELSRRPLFYLSPQLNERRRMLQLLKLATSAHKLSRCALHLAVYYMDRFV 99
            |....|.||...:|.:||........|||||.||....|:.:.::...|...|.|||||.:|.|:
  Rat     8 WRGQLAADIHQALRYKELKLPSYKGQSPQLNLRRYFADLIAIVSNRFTLCPSARHLAVYLLDLFM 72

  Fly   100 DYYKIRPDKLLLVAITCLHIAAQIENTDAFIPRYSEMNRL-----VKNAYTAFEYKAVERKILCF 159
            |.|.....:|.|||::||.:|::.|..:..:|:..::|.|     :....|......:|..:|..
  Rat    73 DRYDSSIQQLHLVALSCLLLASKFEEKEDSVPKLEQLNSLGCMTNMNLVLTKQNLLHMELLLLET 137

  Fly   160 LNFELIRPTTASFVELFACSFLTRSDFKNYIEMLDEYERNHHTQPYQRYISFEEMLSILAQLLLR 224
            ..:.|..||.|.|:|.:....:..:|.             |...|   .:..|:....:|    :
  Rat   138 FQWNLCLPTAAHFIEYYLSEAVHETDL-------------HDGWP---MVCLEKTKLYMA----K 182

  Fly   225 MADYTLYIS----RFANDLPSLLAAACIAAVRQVSGVR-RWSEYLVGLTSYT 271
            .|||.|.:|    .|.|..|||:||||:|:.|.:..:. .|...|..||:|:
  Rat   183 YADYFLEVSLQDYAFLNYAPSLVAAACVASSRIILRLSPTWPTRLHRLTAYS 234

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycJ	NP_523903.1	Cyclin_N	42..164	CDD:278560	38/126 (30%)
		Cyclin_C	<225..>286	CDD:281044	21/52 (40%)
Ccnj	NP_001099839.1	CYCLIN	15..>109	CDD:294043	33/93 (35%)
		Cyclin_C	145..274	CDD:281044	31/110 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	59	1.000	Domainoid score	I10417
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	86	1.000	Inparanoid score	I5065
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D359408at33208
OrthoFinder	1	1.000	-	-		FOG0004344
OrthoInspector	1	1.000	-	-		otm46274
orthoMCL	1	0.900	-	-		OOG6_106900
Panther	1	1.100	-	-	O	PTHR10177
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	9	8.970