Protein Alignment CycJ and Ccni

DIOPT Version :10

• Sequence 1: NP_523903.1
• Gene: CycJ / 38428
• FlyBaseID: FBgn0010317
• Length: 386
• Species: Drosophila melanogaster
• Sequence 2: NP_001099468.1
• Gene: Ccni / 289500
• RGDID: 1309209
• Length: 377
• Species: Rattus norvegicus
• Alignment Length: 314
• Identity: 66/314 - (21%)
• Similarity: 127/314 - (40%)
• Gaps: 70/314 - (22%)

  Fly    46 TMREQELSRRPLFY------------LSPQLNERRRMLQLLKLATSAHKLSRCALHLAVYYMDRF 98
            ::.|:.:||....:            :||  ::|..::|.|........|......||...:|||
  Rat    14 SLLERAISREAQMWKVNVPKIPTNQNVSP--SQRDEVIQWLAKLKYQFNLYPETFALASSLLDRF 76

  Fly    99 VDYYKIRPDKLLLVAITCLHIAAQIENTDAFIPRYSEMNRLVKNAY---TAFEYKAVERKILCFL 160
            :...|..|..|..:||:|..:||:....|..||   .:..|.::::   ::.|...:||.||..|
  Rat    77 LATVKAHPKYLNCIAISCFFLAAKTVEEDEKIP---VLKVLARDSFCGCSSSEILRMERIILDKL 138

  Fly   161 NFELIRPTTASFVELF-ACSFLTRSDFKNYIEMLDEYERNHHTQPYQRYISFEEMLSILAQLLLR 224
            |::|...|...|:.:| |.:..||.      ::|....|          :|..:.|::|.:.||
  Rat   139 NWDLHTATPLDFLHIFHAIAVSTRP------QLLFSLPR----------LSPSQHLAVLTKQLL- 186

  Fly   225 MADYTLYISRFANDLPSLLAAACIA-------------AVRQVSGVRRWSEYLV---GLTSYTEA 273
               :.:..::......|:||.|.::             .:..:...:..|..|:   .|.:|..:
  Rat   187 ---HCMACNQLLQFKGSMLALAMVSLEMEKLIPDWLPLTIELLQKAQMDSSQLIHCRELVAYHLS 248

  Fly   274 NVEPYMNVLTDYYY----YHVIQTDYGS----PSVQTNQSLASPDSGFEESFTE 319
            .::..:.:.:.|.|    :.::..|.|:    ||     |::.||...:.|..|
  Rat   249 ALQSSLPLNSVYVYRPLKHTLVTCDKGAFKLHPS-----SISGPDFSKDNSKPE 297

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycJ	NP_523903.1	CYCLIN_CCNJ-like_rpt1	61..162	CDD:410231	29/103 (28%)
		CYCLIN_CCNJ-like_rpt2	167..282	CDD:410232	21/131 (16%)
Ccni	NP_001099468.1	CYCLIN_CCNI-like	44..142	CDD:410230	28/100 (28%)