Protein Alignment CycJ and cdc13

DIOPT Version :10

• Sequence 1: NP_523903.1
• Gene: CycJ / 38428
• FlyBaseID: FBgn0010317
• Length: 386
• Species: Drosophila melanogaster
• Sequence 2: NP_001342891.1
• Gene: cdc13 / 2540880
• PomBaseID: SPBC582.03
• Length: 482
• Species: Schizosaccharomyces pombe
• Alignment Length: 317
• Identity: 71/317 - (22%)
• Similarity: 112/317 - (35%)
• Gaps: 94/317 - (29%)

  Fly    14 VDRKLKKTCPQADVER-LAKTH-------------------W-----LTDYARDIFLTMREQELS 53
            :.:||||...:..|.: :.|.|                   |     :::|..|||..:.|.|:.
pombe   153 IPKKLKKDVDERVVSKDIPKLHRDSVESPESQDWDDLDAEDWADPLMVSEYVVDIFEYLNELEIE 217

  Fly    54 RRPLFYLSPQLNERRRML--QLLKLAT-------SAHKLSRCALHLAVYYMDRFVDYYKIRPDKL 109
            ..|    ||...:|::.|  ::..:.|       |..:|....|.|||..:|||:.......:||
pombe   218 TMP----SPTYMDRQKELAWKMRGILTDWLIEVHSRFRLLPETLFLAVNIIDRFLSLRVCSLNKL 278

  Fly   110 LLVAITCLHIAAQIENTDAFIPRYSEMNRLVKNAYTAFEYKAVERKILCFLNFELIRPTTASFVE 174
            .||.|..|.||::.|  :...|.......:....|...|....||.||..|.|.|..|...:|:.
pombe   279 QLVGIAALFIASKYE--EVMCPSVQNFVYMADGGYDEEEILQAERYILRVLEFNLAYPNPMNFLR 341

  Fly   175 LFACSFLTRSDF---------KNYIE--MLDEYERNHHTQPYQRYISFEEMLSILAQLLLRMADY 228
            .     ::::||         |..:|  :||     |...||.
pombe   342 R-----ISKADFYDIQTRTVAKYLVEIGLLD-----HKLLPYP---------------------- 374

  Fly   229 TLYISRFANDLPSLLAAACIAAVRQVSGVRRWSEYLVGLTSYTEANVEPYMNVLTDY 285
                       ||...||.:...|::.|...|:..||..:.|.|..:...:..:.:|
pombe   375 -----------PSQQCAAAMYLAREMLGRGPWNRNLVHYSGYEEYQLISVVKKMINY 420

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycJ	NP_523903.1	CYCLIN_CCNJ-like_rpt1	61..162	CDD:410231	31/109 (28%)
		CYCLIN_CCNJ-like_rpt2	167..282	CDD:410232	22/125 (18%)
cdc13	NP_001342891.1	COG5024	5..454	CDD:227357	71/317 (22%)