Protein Alignment CycJ and rem1

DIOPT Version :10

• Sequence 1: NP_523903.1
• Gene: CycJ / 38428
• FlyBaseID: FBgn0010317
• Length: 386
• Species: Drosophila melanogaster
• Sequence 2: NP_595798.1
• Gene: rem1 / 2540118
• PomBaseID: SPBC16E9.17C
• Length: 402
• Species: Schizosaccharomyces pombe
• Alignment Length: 329
• Identity: 66/329 - (20%)
• Similarity: 131/329 - (39%)
• Gaps: 70/329 - (21%)

  Fly    22 CPQADVERLAKTHWLTD------YARDIFLTMREQELSRRPLF-YLSPQ---LNERRRMLQLLKL 76
            |.:.|.|...:..:..|      ||::|...|.:.|:...|.: ::|.|   :.|.|  ..::..
pombe   119 CAEEDEEEELQMRYSADESVSVEYAKEILSHMEKLEIRFMPDYRHMSAQPYYVTEMR--ASVINW 181

  Fly    77 ATSAH---KLSRCALHLAVYYMDRFVDYYKIRPDKLLLVAITCLHIAAQIENTDAFIPRYSEMNR 138
            ....|   .|...:|.|::..:|||:....:...|:.|...|.|.||.:.|  :...|...::..
pombe   182 IVGVHTCINLLPESLFLSINVLDRFLSLQNVPASKMKLCGATALFIACKYE--EIHPPTVKDLEI 244

  Fly   139 LVKNAYTAFEYKAVERKILCFLNFELIRPTTASFVELFACSFLTRSDFKNYIEMLDEYERNHHTQ 203
            :::..:...:...:|:.:|..|.::|..|...||:.|              :.:::::
pombe   245 VLEGEWIGEDICGMEKYMLMVLQYQLGWPGPVSFLRL--------------LTIVNKW------- 288

  Fly   204 PYQRYISFEEMLSILAQLLLRMADYTLYISRFANDLPSLLAAACIAAVRQVSGVRRWSEYLVGLT 268
                    |..|.|:.:..|   :.:|...||::...|.|.|.|....:.:.....||..|..:|
pombe   289 --------ESQLRIMIKYFL---EVSLVEQRFSSLRASQLVATCAYTGQSILQEENWSNTLPQIT 342

  Fly   269 SYTEANVEPYMNVL-----TDYYYYHVIQTDYGSP-----SVQTNQSLASPDSGFEESFTENTNL 323
            .|...::..|:::|     ..:.:::.|.:.|.:|     |.|.:..:|:           ||||
pombe   343 GYDYMSLVSYVHLLLKCLENPFDHHYAIYSKYATPYFHGISRQVHDWIAT-----------NTNL 396

  Fly   324 VVSD 327
            :..|
pombe   397 MAMD 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycJ	NP_523903.1	CYCLIN_CCNJ-like_rpt1	61..162	CDD:410231	22/106 (21%)
		CYCLIN_CCNJ-like_rpt2	167..282	CDD:410232	21/114 (18%)
rem1	NP_595798.1	COG5024	1..402	CDD:227357	66/329 (20%)