DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycJ and T24A6.1

DIOPT Version :9

Sequence 1:NP_523903.1 Gene:CycJ / 38428 FlyBaseID:FBgn0010317 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_001309661.1 Gene:T24A6.1 / 188821 WormBaseID:WBGene00020744 Length:91 Species:Caenorhabditis elegans


Alignment Length:84 Identity:17/84 - (20%)
Similarity:32/84 - (38%) Gaps:14/84 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 LVAITCLHIAAQIENTDAFIPRYSEMNRLVKNAYTAFEYKAVERKILCFLNFELIRPTTASFVEL 175
            ||.:|.:.|....||              :.|..|..:...:||.::....|.:.:||.:.....
 Worm     5 LVGMTSMMIKKIREN--------------LPNNPTVPDILLMERFLIGKFEFVVAKPTPSWLGSC 55

  Fly   176 FACSFLTRSDFKNYIEMLD 194
            ||.........:|.:::|:
 Worm    56 FAKRINLTKKMRNDVKLLE 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycJNP_523903.1 Cyclin_N 42..164 CDD:278560 11/52 (21%)
Cyclin_C <225..>286 CDD:281044
T24A6.1NP_001309661.1 COG5024 <2..88 CDD:227357 17/84 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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