Protein Alignment CycJ and cyb-3

DIOPT Version :9

• Sequence 1: NP_523903.1
• Gene: CycJ / 38428
• FlyBaseID: FBgn0010317
• Length: 386
• Species: Drosophila melanogaster
• Sequence 2: NP_506825.4
• Gene: cyb-3 / 180040
• WormBaseID: WBGene00000868
• Length: 385
• Species: Caenorhabditis elegans
• Alignment Length: 306
• Identity: 66/306 - (21%)
• Similarity: 120/306 - (39%)
• Gaps: 71/306 - (23%)

  Fly    22 CP--QADVERLAKTHWLTDYARDIFLTMREQELSRRPLFYL--SPQLNERRR------MLQLLKL 76
            ||  ..|:|.......::|||:.||...|.:|:..|...||  .|:::.:.|      |:::.:.
 Worm    93 CPHYDYDLEEAGNPDSISDYAQGIFDYYRHREVHFRVRKYLHKHPEVDVKTRAILIDWMVEIQET 157

  Fly    77 ATSAHKLSRCALHLAVYYMDRFVDYYKIRPDKLLLVAITCLHIAAQIENTDAFIPRYSEMNRLVK 141
            ....|:....|:.|...|:.:..:..|....||..|||   .|||:.:....  |...::..|..
 Worm   158 FELNHETLYNAVKLTDMYLCKTKNVDKNTIQKLACVAI---FIAAKYDERSP--PLVDDLIYLSG 217

  Fly   142 NAYTAFEYKAVERKILCFLNFELIRPTTASFVELF--AC-------------------------- 178
            :.::..|..|:||::...:.::|..|.:..::..|  .|
 Worm   218 DRFSRDELLAMERELFATVGYDLGSPLSYRYLRRFGRVCRVDMKTLTMGRFILETSLMVYEYAMV 282

  Fly   179 --SFLTRSDFKNYIEMLD---EYERNHHTQPYQRYISFEEMLSILAQLLLRMADYTLYISRFAND 238
              |.|..:.|...:.|||   |||.|...:.|..:.. ||::.::        ::..:|..|:.|
 Worm   283 SQSRLAAAAFVLAMRMLDKNNEYEWNPVLEKYSGFTG-EEVMPLV--------EHMNHILHFSKD 338

  Fly   239 LPSLLAAACIAAVRQ---------VSGVRRWSEYLVGLTSYTEANV 275
                 ..|.:.:|||         |:.:....:.|..:.|:|.|.|
 Worm   339 -----KWAQLTSVRQKYSHEVFFHVASIPMLPDTLKVVDSHTYAPV 379

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycJ	NP_523903.1	Cyclin_N	42..164	CDD:278560	29/129 (22%)
		Cyclin_C	<225..>286	CDD:281044	13/60 (22%)
cyb-3	NP_506825.4	Cyclin_N	116..241	CDD:278560	29/129 (22%)
		Cyclin_C	243..364	CDD:281044	24/134 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D993640at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920