DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycJ and Ccnd3

DIOPT Version :10

Sequence 1:NP_523903.1 Gene:CycJ / 38428 FlyBaseID:FBgn0010317 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_031658.1 Gene:Ccnd3 / 12445 MGIID:88315 Length:292 Species:Mus musculus


Alignment Length:249 Identity:58/249 - (23%)
Similarity:94/249 - (37%) Gaps:61/249 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LTMREQELSRRPLFY-----LSPQLNERRRMLQLLKLATSAHKLSRC---ALHLAVYYMDRFVDY 101
            |.:.|:.:.|...|.     :.|.:   |:||....|.....:  ||   ...||:.|:||::..
Mouse    32 LRLEERYVPRASYFQCVQKEIKPHM---RKMLAYWMLEVCEEQ--RCEEDVFPLAMNYLDRYLSC 91

  Fly   102 YKIRPDKLLLVAITCLHIAAQI-ENTDAFIPR---YSEMNRLVKNAYTAFEYKAVERKILCFLNF 162
            ...|..:|.|:...||.:|::: |.|...|.:   |::      .|...::.:..|..:|..|.:
Mouse    92 VPTRKAQLQLLGTVCLLLASKLRETTPLTIEKLCIYTD------QAVAPWQLREWEVLVLGKLKW 150

  Fly   163 ELIRPTTASFVELFACSFLTRSDFKNYIEMLDEYERNHHTQPYQRYISFEEMLSILAQLLLRMAD 227
            :|.......|:.|........||.:..::        .|.|.:               |.|...|
Mouse   151 DLAAVIAHDFLALILHRLSLPSDRQALVK--------KHAQTF---------------LALCATD 192

  Fly   228 YTLYISRFANDLPSLLAAACIAAVRQVSGVRRWS-------EYLVGLTSYTEAN 274
            ||     ||...||::|...|.|.  |.|:...|       |.|.|:|. ||.:
Mouse   193 YT-----FAMYPPSMIATGSIGAA--VLGLGACSMSADELTELLAGITG-TEVD 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycJNP_523903.1 CYCLIN_CCNJ-like_rpt1 61..162 CDD:410231 26/107 (24%)
CYCLIN_CCNJ-like_rpt2 167..282 CDD:410232 27/115 (23%)
Ccnd3NP_031658.1 CYCLIN_SF 2..151 CDD:477360 30/129 (23%)
CYCLIN_SF 156..260 CDD:477360 27/114 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 256..292
Blue background indicates that the domain is not in the aligned region.

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