DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycJ and Ccnd2

DIOPT Version :10

Sequence 1:NP_523903.1 Gene:CycJ / 38428 FlyBaseID:FBgn0010317 Length:386 Species:Drosophila melanogaster
Sequence 2:XP_036021678.1 Gene:Ccnd2 / 12444 MGIID:88314 Length:349 Species:Mus musculus


Alignment Length:320 Identity:67/320 - (20%)
Similarity:118/320 - (36%) Gaps:75/320 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 CPQADVERLA--KTHWLTDYARDIFLTMREQELSRRPLFY-----LSPQLNERRRMLQLLKL-AT 78
            |.:.|..|.|  ..:.|.|......||:.|:.|.:...|.     :.|.:   |||:....| ..
Mouse    65 CCEVDPVRRAVPDRNLLEDRVLQNLLTIEERYLPQCSYFKCVQKDIQPYM---RRMVATWMLEVC 126

  Fly    79 SAHKLSRCALHLAVYYMDRFVDYYKIRPDKLLLVAITCLHIAAQIENTDAFIPRYSE-MNRLVKN 142
            ...|.......||:.|:|||:.........|.|:...|:.:|::::.|   ||..:| :.....|
Mouse   127 EEQKCEEEVFPLAMNYLDRFLAGVPTPKTHLQLLGAVCMFLASKLKET---IPLTAEKLCIYTDN 188

  Fly   143 AYTAFEYKAVERKILCFLNFELIRPTTASFVELFACSFLTRSDFKNYIEMLDEYERNHHTQPYQR 207
            :....|....|..:|..|.:.|...|...|:|             :.:..|          |.|:
Mouse   189 SVKPQELLEWELVVLGKLKWNLAAVTPHDFIE-------------HILRKL----------PQQK 230

  Fly   208 YISFEEMLSIL---AQLLLRM--ADYTLYISRFANDLPSLLAAACIAAVRQVSGVRRWSEY---- 263
                 |.||::   ||..:.:  .|:     :||...||::|...:.|.  :.|:::..|.    
Mouse   231 -----EKLSLIRKHAQTFIALCATDF-----KFAMYPPSMIATGSVGAA--ICGLQQDDEVNTLT 283

  Fly   264 ------LVGLTSYTEAN--------VEPYMNVLTDYYYYHVIQTDYGSPSVQTNQSLASP 309
                  |:...::|:.:        :|..:  |.....:...|.:.||.||:......:|
Mouse   284 CDALTELLAKITHTDVDCLKACQEQIEALL--LNSLQQFRQEQHNAGSKSVEDPDQATTP 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycJNP_523903.1 CYCLIN_CCNJ-like_rpt1 61..162 CDD:410231 25/102 (25%)
CYCLIN_CCNJ-like_rpt2 167..282 CDD:410232 23/137 (17%)
Ccnd2XP_036021678.1 CYCLIN_CCND2_rpt1 61..209 CDD:410277 36/149 (24%)
CYCLIN_CCND2_rpt2 214..318 CDD:410280 24/140 (17%)

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