DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycJ and ccno

DIOPT Version :10

Sequence 1:NP_523903.1 Gene:CycJ / 38428 FlyBaseID:FBgn0010317 Length:386 Species:Drosophila melanogaster
Sequence 2:XP_073805797.1 Gene:ccno / 101883490 -ID:- Length:334 Species:Danio rerio


Alignment Length:234 Identity:59/234 - (25%)
Similarity:96/234 - (41%) Gaps:23/234 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RLAKTHWLTDY--ARDIFLTMREQELSRRPLFYLS--PQLNERRRMLQLLKLATSAHKLS----R 85
            |.|....:.||  :...|:..|..:.....|..||  ||:....|...:..|.....:||    .
Zfish    59 RCASDSQVCDYEDSETCFIIQRLNQQQFLALNCLSRQPQITAEARSKLVSWLIAVRRQLSLSFES 123

  Fly    86 CALHLAVYYMDRFVDYYKIRPDKLLLVAITCLHIAAQIENTDAFIPRYSEMNRLVKNAYTAFEYK 150
            |.  |||..||||:....:..|...|:.:|.|.||.  :..:.:.||.:::..|..|:::..:..
Zfish   124 CC--LAVNIMDRFLITTSVAADCFQLLGVTSLLIAT--KQVEVYSPRITQLLSLCCNSFSREQLC 184

  Fly   151 AVERKILCFLNFELIRPTTASFVELFACSFLTRSDFKNYIEMLDEYERNHHTQPYQRYISFEEML 215
            .:|..||..|||.|..||.|.|::.|...|......    |.:.....:.|.:|......:..:.
Zfish   185 NLECLILLRLNFRLAAPTLAFFLDYFTSRFTGHQTG----EFISAQNAHLHKEPSSAENKWRWLA 245

  Fly   216 SILAQLLLRMADYTLYISRFANDLPSLLAAACIAAVRQV 254
            ..:.:|.|  ||||     |...:||::|...:...:.:
Zfish   246 CKVCELSL--ADYT-----FNKYMPSVIAQCALKLAKDL 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycJNP_523903.1 CYCLIN_CCNJ-like_rpt1 61..162 CDD:410231 29/106 (27%)
CYCLIN_CCNJ-like_rpt2 167..282 CDD:410232 19/88 (22%)
ccnoXP_073805797.1 None

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