DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycJ and XB940382

DIOPT Version :9

Sequence 1:NP_523903.1 Gene:CycJ / 38428 FlyBaseID:FBgn0010317 Length:386 Species:Drosophila melanogaster
Sequence 2:XP_002943185.2 Gene:XB940382 / 100492352 XenbaseID:XB-GENE-940383 Length:436 Species:Xenopus tropicalis


Alignment Length:334 Identity:73/334 - (21%)
Similarity:126/334 - (37%) Gaps:70/334 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DYARDIFLTMREQELSRRPLFYLSPQLNERRRMLQLLKLATSAHKLSRCALHLAVYYMDRFVDYY 102
            ||..:.||. .::|::.....|::..:....|.|          :|....|.|.:.:::|:|...
 Frog    87 DYQMENFLE-NQKEINPTSWNYITTLMINVHRYL----------RLDFQTLCLGINFLERYVSCT 140

  Fly   103 KIRPDKLLLVAITCLHIAAQIEN------TDAFIPRYSEMNRLVKNAYTAFEYKAVERKILCFLN 161
            ...||.|..|..|||::|.::..      ...|:|       |.....|..|.:.:||.||..|.
 Frog   141 PTDPDTLTRVGATCLYMAYKVAELRYPLPPKHFLP-------LFDYRMTPAEMRHLERTILRKLL 198

  Fly   162 FELIRPTTASFVELFACSFLTRSDFKNYIEMLDEYERNHHTQPYQRYISFEEMLSI--LAQLLLR 224
            |.|..||...|:|.|:...||..:               ...|.|...:.:.:.:.  :|.|.|.
 Frog   199 FRLGVPTIDFFLEHFSLLRLTNQE---------------ECSPAQLTRAAKSLTAARGIAALCLN 248

  Fly   225 MADYTLYISRFANDLPSLLAAACIAAVRQV----SGVRRWSEYLVGLTSYTEANVEPYMN----- 280
            . .:..|:.:     |||:|..|:....::    :.|:      |..|.|.|..:|..:.     
 Frog   249 Q-HHDFYMHK-----PSLMALCCLNVADKIYCYNNPVK------VAPTDYPEHQIEECIEKICHL 301

  Fly   281 VLTDYYYYH-----VIQTDYGSPSVQTNQSLASPDSGFEESFTENTNLVVSDEVVTVETYNIITV 340
            |...:|:.|     |....:.|.:..|.:..|:|.:.......|.|..|.|....|..:.::   
 Frog   302 VSIGHYFLHPLLPGVYPEIFPSFNHPTTRPAATPTNQHLPEGRERTPEVASTSRDTAGSQHL--- 363

  Fly   341 QLQDPSPHS 349
            ::.:.|.||
 Frog   364 EMAERSSHS 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycJNP_523903.1 Cyclin_N 42..164 CDD:278560 30/127 (24%)
Cyclin_C <225..>286 CDD:281044 13/69 (19%)
XB940382XP_002943185.2 COG5024 <92..336 CDD:227357 62/288 (22%)
Cyclin_N 92..202 CDD:365896 30/127 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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