DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycJ and ccnb1

DIOPT Version :9

Sequence 1:NP_523903.1 Gene:CycJ / 38428 FlyBaseID:FBgn0010317 Length:386 Species:Drosophila melanogaster
Sequence 2:XP_031753568.1 Gene:ccnb1 / 100101736 XenbaseID:XB-GENE-921525 Length:392 Species:Xenopus tropicalis


Alignment Length:251 Identity:60/251 - (23%)
Similarity:107/251 - (42%) Gaps:46/251 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TDYARDIFLTMREQELSR--RPLFYLSPQLNERRRMLQLLKLATSAH---KLSRCALHLAVYYMD 96
            :||.:||:..:|..|:.:  ||.:....::|...|.: |:......|   ||.:..:.:.:..:|
 Frog   129 SDYVKDIYCYLRNMEVKQAIRPRYLDGQEINGNMRAI-LVDWLVQVHLRFKLLQETMSMTIAILD 192

  Fly    97 RFVDYYKIRPDKLL-LVAITCLHIAAQIENTDAFIPRYSEMNRLVKNAYTAFEYKAVERKILCFL 160
            ||:....: |.||| |..::.:.||.:.|  :.:.|...:...:..:.||..:.:.:|.:||..|
 Frog   193 RFLQENPV-PKKLLQLAGVSAMFIACKYE--EIYCPSIGDFAFVTDHTYTKSQIRNMEMQILRVL 254

  Fly   161 NFELIRPTTASFVELFACSFLTRSDFKNYIEMLDEYERNHHTQPYQRYISFEEMLSILAQLLLR- 224
            .|::.||        ....||.|:      ..:.|.:..|||               ||:.|:. 
 Frog   255 KFDIGRP--------LPLHFLRRA------SKIGEVDSVHHT---------------LAKYLIEL 290

  Fly   225 -MADYTLYISRFANDLPSLLAAACIAAVRQVSGVRRWSEYLVGLTSYTEANVEPYM 279
             |.||.:     .:..||.||||......::.....|:..|....:|.|:::.|.|
 Frog   291 VMTDYDM-----VHVPPSQLAAAAFCLAMKILNSGEWTPVLEHYMAYKESSLMPVM 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycJNP_523903.1 Cyclin_N 42..164 CDD:278560 31/127 (24%)
Cyclin_C <225..>286 CDD:281044 15/55 (27%)
ccnb1XP_031753568.1 CYCLIN_SF 128..256 CDD:424085 32/130 (25%)
CYCLIN_SF 261..381 CDD:424085 26/115 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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