DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment armi and HELZ

DIOPT Version :9

Sequence 1:NP_001014556.1 Gene:armi / 38427 FlyBaseID:FBgn0041164 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_006722277.1 Gene:HELZ / 9931 HGNCID:16878 Length:1970 Species:Homo sapiens


Alignment Length:1158 Identity:260/1158 - (22%)
Similarity:426/1158 - (36%) Gaps:325/1158 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 ISQRLASSIDVETEYGQLTVELDNIE-----------------------------MNFIP----- 205
            :|..||.|:..|:..|.:|.:|..::                             .:|.|     
Human   111 VSTILAKSLTGESLNGMVTKDLTRLKTLLSETETATSNALSGYHVEDLDEGSCNGWHFRPPPRGI 175

  Fly   206 TNGDRVRLECNIQLDDGF---------VDKQGEILEVTKLFPTRI----QEGEKCIVERVYVHMV 257
            |:.:...| |...|:.|.         ...|.|:.|..|.:.:|:    |:.|...:...|:..:
Human   176 TSSEEYTL-CKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETL 239

  Fly   258 V------LGPETYILKTDLPTGTDLHLGDIVLADLIECQYSKFTRRAIKITPLEKN--FGATKLT 314
            :      |.||.                  ||::.||         .:|:   |.|  ...|..|
Human   240 IEKWMNSLSPEK------------------VLSECIE---------GVKV---EHNPDLSVTVST 274

  Fly   315 QQSSMGSSGSGKAVTVTGVNRFITAELWQKESVSLKLTNNLNRTLRL--------ESITV-CNDS 370
            ::|.                     :.| ..:::.|....|.|...|        ..|.: ..||
Human   275 KKSH---------------------QTW-TFALTCKPARMLYRVALLYDAHRPHFSIIAISAGDS 317

  Fly   371 ESQLSVVSPLESKEISSGS-----------EITVTFEIHTQFLGEAIEKYVLNFDLLKVRRVFTV 424
            .:|:|...|...:|...|.           ::.:.|  :|:..|...:..|.:|.|..|.....:
Human   318 TTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAF--NTEIFGTFRQTIVFDFGLEPVLMQRVM 380

  Fly   425 IVCKTKEEVAEAEKRMIAAEALMAPGRNSQERSRFYANQVWCNKVDVIPGQQIVTKRRFVALRLG 489
            |...:.|::   |..|.|.:.|:...:.....|:        ..:|..|.:....::..: :|  
Human   381 IDAASTEDL---EYLMHAKQQLVTTAKRWDSSSK--------TIIDFEPNETTDLEKSLL-IR-- 431

  Fly   490 CFEVPKELRQICLTSERRQEMIKAIEQHYSFLTEPLSIKTYMHRFRLLLHLEEIECFVNFRNYD- 553
             :::|....|:..               .|.|.:.|:...|..|...||::|||..:....|.. 
Human   432 -YQIPLSADQLFT---------------QSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEISNTSG 480

  Fly   554 --------RDRAHFLRDGEF------LTLQIENLAERRPSLVIG--------------------- 583
                    :|..:..|....      |.:|::.||....:.|.|                     
Human   481 ASTSRILLQDTTNVTRGFSCCSKLFNLKVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLS 545

  Fly   584 -DTL-------RVINPWSDP-------DSQTTKS--YEGIIHKVLFDRILLKFHSSFQEKYN--- 628
             |||       :|...:..|       .:|.||.  ||..|.:...:.|.|:......|:.|   
Human   546 EDTLAGRLVMTKVNAVYLLPVPKQKLVQTQGTKEKVYEATIEEKTKEYIFLRLSRECCEELNLRP 610

  Fly   629 --GEDYRLEFYFSRYSFRKQHHAISKIV--GVMGEDFLFPSKVTKRENPQLDVYMKDDDMYLYDS 689
              .....|:|..:|....:.|:|:.:|.  ||:..|......:....|.|.|             
Human   611 DCDTQVELQFQLNRLPLCEMHYALDRIKDNGVLFPDISMTPTIPWSPNRQWD------------- 662

  Fly   690 KLEWYNQSLNSIQKRAVFNILRGEAENIPYVL-FGPPGSGKTMTLIETLLQLVRNLPGARILVGT 753
              |..:..||:.||.||..|....|..:|.|| .||.|:|||.||.:.:..:::....:|||:.|
Human   663 --EQLDPRLNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICT 725

  Fly   754 PSNSSADLVTKRLID---SKALLQGDFIRLVSYNQVEKDLIPPEIMSYCATSDVGAVGSCEDKMM 815
            .|||:|||..|..:.   .....|...:|:...|:..| .:.|.:..||..|...:......|  
Human   726 HSNSAADLYIKDYLHPYVEAGNPQARPLRVYFRNRWVK-TVHPVVHQYCLISSAHSTFQMPQK-- 787

  Fly   816 VTESGLKLRCQAKFIGTHRITISTCTTLGNFLQLGFPAGHFTHVLFDEAGQCTEPETMVPIVMLT 880
              |..||          ||:.:.|..|.....||....|.|||:|.|||.|..|.||::|:.:.|
Human   788 --EDILK----------HRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALAT 840

  Fly   881 KKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERLLERSPYRKDLQRFPESSGYNPLVLTKLL 945
             :.:::||:||..||...|.|..|.:....:|.|:||.|..|     ..||        ....|.
Human   841 -QNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHYP-----AEFP--------CRILLC 891

  Fly   946 YNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESRLLSKLRCVFESEKDIPQAHGTF----FYGI 1006
            .|||:..:|::..|.|||:.:|:                     .|.|.  .||..|    |:..
Human   892 ENYRSHEAIINYTSELFYEGKLM---------------------ASGKQ--PAHKDFYPLTFFTA 933

  Fly  1007 IGENRQNNDSPSWFNPQEVREVFLMTIALYR------ANVTADQIGIITPYQKQVKMLRSMFIG- 1064
            .||:.|..:|.:::|..||.||......|.|      ..:....||::|||..||..:|:.... 
Human   934 RGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKK 998

  Fly  1065 --TDVVMPKIGSVEEFQGQERDIILISTVRS------------SEEILRMDARFSL--GFVRCSK 1113
              :||.:.::.:|   ||::..::.:||||:            .:|.|..|:...|  ||:...|
Human   999 RLSDVNVERVLNV---QGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYK 1060

  Fly  1114 RLNVAVSRARAMMIIFGNP-HLLAVDEC---WRQLILFCVKNNAYFGCDLPQM 1162
            .||.|::||::::.:.|:| .|.::..|   |.:.|..|.:|::..|....|:
Human  1061 LLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSLHGITFEQI 1113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armiNP_001014556.1 AAA_11 698..902 CDD:289831 69/207 (33%)
AAA_19 720..768 CDD:289986 21/48 (44%)
DNA2 <840..1155 CDD:224037 98/345 (28%)
UvrD_C_2 909..1132 CDD:304668 65/249 (26%)
HELZXP_006722277.1 zf-CCCH 181..205 CDD:279036 4/24 (17%)
AAA_11 669..861 CDD:289831 69/207 (33%)
P-loop_NTPase 669..>766 CDD:304359 34/97 (35%)
DNA2 <785..1099 CDD:224037 103/367 (28%)
UvrD_C_2 868..1079 CDD:304668 65/249 (26%)
PHA03160 <1656..1815 CDD:165431
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D286011at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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