DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment armi and HELZ2

DIOPT Version :9

Sequence 1:NP_001014556.1 Gene:armi / 38427 FlyBaseID:FBgn0041164 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_024307774.1 Gene:HELZ2 / 85441 HGNCID:30021 Length:2677 Species:Homo sapiens


Alignment Length:570 Identity:137/570 - (24%)
Similarity:220/570 - (38%) Gaps:147/570 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   694 YN-----QSLNSIQKRAVFNILRGEAENIPY-VLFGPPGSGKTMTLIETLLQL------------ 740
            ||     ..||..|     |:...||...|: |:.||||:|||:..:..:...            
Human  2172 YNIPGGRHKLNPSQ-----NVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGG 2231

  Fly   741 ----VRNLPGARILVGTPSNSSAD----LVTKRL---------------------IDSKALLQ-- 774
                .:.|.|..||...|||.|.|    |:.:|:                     :.|:.||:  
Human  2232 PPRGEKRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKS 2296

  Fly   775 ------GDFIRLVSYNQVEKDLIPP---EIMSYCATSDVGAVGSCED----KMMVTESGLKLRCQ 826
                  ...:|.::.:...:....|   ||.::......|.:.|.||    |.::.|:       
Human  2297 PREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEA------- 2354

  Fly   827 AKF-IGTHRITISTCTTLGN----FLQLGFPAGHFTHVLFDEAGQCTEPETMVPIVMLTKKRSQV 886
            .|| :..|.:.:.||:...:    .|.:       ..:|.||||..|||||::|:|.. .:..:|
Human  2355 RKFELDRHEVILCTCSCAASASLKILDV-------RQILVDEAGMATEPETLIPLVQF-PQAEKV 2411

  Fly   887 VLSGDPRQLQSIVTSRIASKMGFSISFLERLLE-----RSPYR--KDLQRFPESSGYNPLVLTKL 944
            ||.||.:||:.:|.:.....:|...|..||..|     .:.||  :.:..||..:.|...:  |.
Human  2412 VLLGDHKQLRPVVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKL--KT 2474

  Fly   945 LYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESRLLSKLRCVFESEKDIPQAHGTFFYGIIGE 1009
            ....|..||::....:     |..||:........|.|                       ::..
Human  2475 WQGLRRPPSVLGHAGK-----ESCPVIFGHVQGHERSL-----------------------LVST 2511

  Fly  1010 NRQNNDSPSWFNPQEVREVFLMT--IALYRANVTADQIGIITPYQKQVKMLRSMFIGTDVVMPKI 1072
            :..|.:|.:  |.:||.||..:|  :.|.| .|....|.::|||..|...:........:....:
Human  2512 DEGNENSKA--NLEEVAEVVRITKQLTLGR-TVEPQDIAVLTPYNAQASEISKALRREGIAGVAV 2573

  Fly  1073 GSVEEFQGQERDIILISTVRSSEEILRMDARFS-------LGFVRCSKRLNVAVSRARAMMIIFG 1130
            .|:.:.||.|...:|:||||:..: ..:|.|.:       ||||....::||||:||:..:.:.|
Human  2574 SSITKSQGSEWRYVLVSTVRTCAK-SDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIG 2637

  Fly  1131 NPHLLAVDECWRQLILFCVKNNAYFGCDLPQMVINQKDEVPVCLETFVPS 1180
            :..||.....||.|:.||.          .|..:....:|.||....:||
Human  2638 DHLLLRCCPLWRSLLDFCE----------AQQTLVPAGQVRVCRRPTMPS 2677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armiNP_001014556.1 AAA_11 698..902 CDD:289831 65/265 (25%)
AAA_19 720..768 CDD:289986 19/88 (22%)
DNA2 <840..1155 CDD:224037 86/334 (26%)
UvrD_C_2 909..1132 CDD:304668 56/238 (24%)
HELZ2XP_024307774.1 ZnF_U1 39..69 CDD:197732
AAA_11 541..705 CDD:331082
UvrD_C_2 715..915 CDD:328976
RNB 1334..1693 CDD:214935
AAA_11 2180..2427 CDD:315699 65/266 (24%)
AAA_12 2434..2639 CDD:315700 56/238 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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