Protein Alignment armi and LBA1

DIOPT Version :10

• Sequence 1: NP_647816.2
• Gene: armi / 38427
• FlyBaseID: FBgn0041164
• Length: 1188
• Species: Drosophila melanogaster
• Sequence 2: NP_199512.2
• Gene: LBA1 / 834747
• AraportID: AT5G47010
• Length: 1254
• Species: Arabidopsis thaliana
• Alignment Length: 783
• Identity: 179/783 - (22%)
• Similarity: 307/783 - (39%)
• Gaps: 223/783 - (28%)

  Fly   465 WCNKVDVIPGQQIVTKRRFVALRLGCF-----EVPKELRQICLTSERRQ---EMIKAIEQHY--- 518
            ||..:|.                 .||     :||.|..|:    ..||   :.|..||:.:
plant   248 WCPLIDD-----------------RCFLPWLVKVPSEQEQL----RARQISAQQINKIEELWKTN 291

  Fly   519 -----------SFLTEPLSIK-------TYMHRFRLLLHLEEIECFVNFRNYDRDRAHFLRDG-- 563
                       ....||..::       .|.:.|..|:.||        .:||:    .:::.
plant   292 PDATLEDLEKPGVDDEPQPVQPKYEDAYQYQNVFAPLIKLE--------ADYDK----MMKESQS 344

  Fly   564 -EFLTLQIE-NLAERRPS------------LVIGDTLRV------INPWSDPDSQTTKSYEGIIH 608
             |.||::.: .|.::|.:            ||.||.||:      ::|          |::.:.|
plant   345 KENLTVRWDIGLNKKRVAYFVFPKEENELRLVPGDELRLRYSGDAVHP----------SWQSVGH 399

  Fly   609 KVLFDRILLKFHSSFQEKYNGEDYRLEFYFSRYSFRKQHHAISKIVGVMGEDFLFPSKVTKRENP 673
                   ::|..:.       |:..||...::......:|..|       .||::.|....|...
plant   400 -------VIKLTAQ-------EEVALELRANQGVPIDVNHGFS-------VDFVWKSTSFDRMQG 443

  Fly   674 QLDVYMKDDDM---YLYDSKLEWYNQS------------------LNSIQKRAVFNILRGEAENI 717
            .:..:..|:..   |:|...|....::                  ||:.|..||.::|:....
plant   444 AMKNFAVDETSVSGYIYHQLLGHEVEAQMVRNTLPRRFGVPGLPELNASQVNAVKSVLQKPIS-- 506

  Fly   718 PYVLFGPPGSGKTMTLIETLLQLVRNLPGARILVGTPSNSSADLVTKRLIDSKALLQGDFIRLVS 782
              ::.||||:|||:|....:..:.:...| ::||..|||.:.|.:.:: |.:..|   ..:||.:
plant   507 --LIQGPPGTGKTVTSAAIVYHMAKQGQG-QVLVCAPSNVAVDQLAEK-ISATGL---KVVRLCA 564

  Fly   783 YNQVEKDLIPPEIMS------YCATS-------------DVGAVGSCEDKMMVTESGLKLRCQAK 828
            .:: |....|.|.::      :..||             :.|.:.|.::|..   ..||...:.:
plant   565 KSR-EAVSSPVEYLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKY---KNLKRATERE 625

  Fly   829 FIGTHRITISTCT-----TLGNFLQLGFPAGHFTHVLFDEAGQCTEPETMVPIVMLTKKRSQVVL 888
            ...:..:...||.     .|.||        .|..||.||:.|.||||.::|:|:..|   ||||
plant   626 ITQSADVICCTCVGAADLRLSNF--------RFRQVLIDESTQATEPECLIPLVLGVK---QVVL 679

  Fly   889 SGDPRQLQSIVTSRIASKMGFSISFLERLLERSPYRKDLQRFPESSGYNPLVLTKLLYNYRALPS 953
            .||..||..::..:.|::.|.:.|..|||:              :.|..|:   :|...||..|:
plant   680 VGDHCQLGPVIMCKKAARAGLAQSLFERLV--------------TLGIKPI---RLQVQYRMHPA 727

  Fly   954 IMSIYSRLFYDDELIPVLSEKDSRESRLLSKLRCVFESEKDIPQAHGTFFYGIIGENRQNNDSPS 1018
            :....|..||:..|        .....::.:.....:....:|. ...|||..:|:...:....|
plant   728 LSEFPSNSFYEGTL--------QNGVTIIERQTTGIDFPWPVPN-RPMFFYVQLGQEEISASGTS 783

  Fly  1019 WFNPQEVREVFLMTIALYRANVTADQIGIITPYQKQVK-----MLRSMFIGTDVVMP-KIGSVEE 1077
            :.|..|...|..:..|..::.|...|||:||||:.|..     |.|:..:...:... ::.||:.
plant   784 YLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDS 848

  Fly  1078 FQGQERDIILISTVRSSEEILRMDARFSLGFVRCSKRLNVAVSRARAMMIIFGNPHLLAVDECWR 1142
            |||:|:|.|::|.|||:|       ...:||:...:|||||::|||..::|.|||.:|:....|.
plant   849 FQGREKDYIILSCVRSNE-------HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 906

  Fly  1143 QLI 1145
            .|:
plant   907 GLL 909

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
armi	NP_647816.2	DEXXQc_Mov10L1	697..949	CDD:350836	70/293 (24%)
		DNA2	<829..1148	CDD:440729	93/328 (28%)
LBA1	NP_199512.2	UPF1_Zn_bind	138..291	CDD:401391	14/63 (22%)
		1B_UPF1-like	344..431	CDD:394815	20/117 (17%)
		TIGR00376	437..920	CDD:273041	133/530 (25%)
		DEXXQc_UPF1	488..723	CDD:350797	70/275 (25%)