DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment armi and AT4G30100

DIOPT Version :10

Sequence 1:NP_647816.2 Gene:armi / 38427 FlyBaseID:FBgn0041164 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_194739.1 Gene:AT4G30100 / 829133 AraportID:AT4G30100 Length:1311 Species:Arabidopsis thaliana


Alignment Length:1384 Identity:285/1384 - (20%)
Similarity:465/1384 - (33%) Gaps:482/1384 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LDQKLMEEKMDQQLKANPNEINGVLSNKIAELTHGLSEMDVSKESSCTARKGVITSLDGDRGVID 94
            :|:..:||.....||. ||:: |....:..|.|    |.:|....:..:.....|..:.|.|.:.
plant    91 VDEGSLEEAKVTSLKV-PNDV-GAPEREEGEWT----ESEVPANDNVHSSSDYSTVTEKDNGTLG 149

  Fly    95 KDVLFETKVAEDIILDLHVGCVVEYLTFTTGEAMRVVKVKSILEHSWEDTSQKEIEKAVDNLKNE 159
            .|:                         .:..|::...|..|.|.|.:|:.      ::|:.:.:
plant   150 LDI-------------------------NSDSALQKKNVNHISESSGKDSG------SIDSPQEQ 183

  Fly   160 KPTFFNTETRSVLGLISQRLASSIDVETEYGQLTV--ELDNIEMNFIPTNGDRVRLECNIQLDDG 222
            ..|....||:.|....:.:.|::          ||  ::|:.:...:.....|..:..|  ||| 
plant   184 GLTVRPRETKGVEASHAIKCANT----------TVKRKMDHQKETMLGKKRHRQTMFLN--LDD- 235

  Fly   223 FVDKQGEILEVTKLFPTRIQEGEKCIVERVYVHMVVLGPETYILKTDLPTGTDLHLGDIVLADLI 287
             |.:.|.|...|   |.| |...:.:|.|. |.....||.|......:|       |.:|..|  
plant   236 -VRQAGPIKTTT---PRR-QNFPQPVVTRT-VRESRAGPPTAEQAGGVP-------GHVVYRD-- 285

  Fly   288 ECQYSKFTRRAIKI-----------TPLEKN----FGATKLTQQSSMGSSGSGKAVTVTGVNRFI 337
                    ::.|.|           ..||.|    .|:...|::.: |.:|.....|.|.|:|  
plant   286 --------QKPIDIPNGGIHPETSEPKLESNGESQSGSAGKTRRMN-GEAGPSAEATSTSVSR-- 339

  Fly   338 TAELWQK--ESVSLKLTNNLNRTLRLESITVCNDSESQLSVVSPLESKEISSGSEITVTFEIHTQ 400
             ...|::  .|..||..::.||     .:.:|    ||.|..|...:|:.:|..:....   .||
plant   340 -QGSWKQPINSRQLKSGHSSNR-----QVPLC----SQTSADSKFGNKKFTSFKKQATN---STQ 391

  Fly   401 FLGEAIEKYVLNFDLLKVRRVFTVIVCKTKEEVAEAEKRMIAAEALMAPGRNSQERSRFYANQVW 465
            :...::|:      ||:              ||..                          .:.|
plant   392 YQDTSVER------LLR--------------EVTN--------------------------EKFW 410

  Fly   466 CNKVDVIPGQQIVTKRRFVALRLGCFEVPKELRQICLTSERRQEMIKAIEQHYSFLTEPLSIKTY 530
            .:..|.                        :|:.:   .||.:.|     ..|..:.|||..:..
plant   411 HHPEDT------------------------DLQSV---PERFESM-----DEYVRVFEPLLFEEC 443

  Fly   531 MHRFRLLLHLEEIECFVNFRNYDRDRAHFL--RDGEFLTLQIENLAERRPSLVIGDTLRVINPWS 593
              |.:|....||:   ....:|.:.|..|:  |:..:..:.:.::.|.:.:...||...:.||..
plant   444 --RAQLYSTWEEL---AEANSYMKVRIKFIERRERGWYDVILNSVNECKWAFKEGDVAVLSNPVP 503

  Fly   594 DPDSQ------------------TTKSYEGIIH-----------KVLFDRILLKFHSSFQEKYNG 629
            :.:.:                  |...:..|:|           |:..:.||.|....       
plant   504 ESEGEHDDVGRVAGTVRRYIPVDTRDPHGAILHFYVGDAYDSGSKIDDNHILRKLKPK------- 561

  Fly   630 EDYRLEFYFSRYSFRKQH---HAISKIVGVMGEDFLFPSKVT----KRENPQL-DVYMKDDDMYL 686
            |.:.|....|..:.::::   ||.|::...|....|.||...    ..:.|.: |.:......:|
plant   562 EIWHLTVLGSIATTQREYVALHAFSQLNPQMQNAILKPSPEQFPNYGEQTPTVPDCFTPSFAGHL 626

  Fly   687 YDSKLEWYNQSLNSIQKRAV----FNILRGEAENI------PYVLF-GPPGSGKTMTL------- 733
            :        :|.|:.|..|:    .:...|.:..:      |:.|. ||||:|||.|:       
plant   627 H--------RSFNAPQLAAIHWAAMHTAAGTSSGVKRQDPWPFTLVQGPPGTGKTHTVWGMLNVI 683

  Fly   734 ------------------------------------IETLLQ-----LVRNLP----GARILVGT 753
                                                |:.:||     |.|.||    ..|:||..
plant   684 HLVQYQQYYTSLLKKLAPESYKQVNESSSDNIVSGSIDEVLQNMDQNLFRTLPKLCAKPRMLVCA 748

  Fly   754 PSNSSADLVTKRLIDSKALLQG-------DFIRL------------------------------- 780
            |||::.|.:..|::| :..:.|       |..|:                               
plant   749 PSNAATDELLSRVLD-RGFIDGEMRVYRPDVARVGVDTQTKAAQAVSVERRSDLLLAKSREEILG 812

  Fly   781 ------VSYNQVEKDLI----------------------PPEIMSYCATSD-----VGAVGSCED 812
                  |...|:.:|:.                      |..:|....|.|     :.||....|
plant   813 HIHNLRVRDAQLSQDIAGLKRELTAAAFANRSQGSVGVDPDVLMVRDQTRDAMLQRLSAVVEARD 877

  Fly   813 KMMVTESGL-----KLRC-------------QAKFIGTHRITISTCTTLGNFLQLGFPAGHFTHV 859
            |.:|..|.|     |.|.             :|.|.....|..:|.::.|..|......| |..|
plant   878 KDLVEMSRLLIVEGKFRAGTSFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLTHG-FDMV 941

  Fly   860 LFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERLLERSPYR 924
            :.|||.|.:|...:.|:.:   ..::.||.|||:||.:.|.|:.|..:.:|.|..||.       
plant   942 VIDEAAQASEVGVLPPLAL---GAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERF------- 996

  Fly   925 KDLQRFPESSGYNPLVLTKLLYNYRALPSIMSIYSRLFY-----DDELIPVLSE----KDSRESR 980
                   :.:|...|:||   ..||..|.|....||.||     |.|.:....:    |||....
plant   997 -------QLAGCPTLLLT---VQYRMHPQIRDFPSRYFYQGRLTDSESVSTAPDEIYYKDSVLKP 1051

  Fly   981 LLSKLRCVFESEKDIPQAHGTFFYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTAD-- 1043
            .|                   ||....|.......|.|:.|..|.|  |.:.:.|:.......  
plant  1052 YL-------------------FFDISHGRESHRGGSVSYENIDEAR--FCVGVYLHLQRTLKSLG 1095

  Fly  1044 ----QIGIITPYQKQVKMLRSMF---IGTDVVMP-KIGSVEEFQGQERDIILISTVRSSEEILRM 1100
                .:|:||||:.|:|.|:..|   :..|.:.. .|.:|:.|||||||:|::|.||:|..    
plant  1096 GGKVSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQGQERDVIIMSCVRASNH---- 1156

  Fly  1101 DARFSLGFVRCSKRLNVAVSRARAMMIIFGNPHLLAVDECWRQLILFCVKNNAYFGCD-LPQMVI 1164
                .:|||...:|:|||::||:..:.:.||...|...|.|..||......|.:...: ||    
plant  1157 ----GVGFVADIRRMNVALTRAKRALWVMGNASALMKCEDWAALITDAKARNCFMEMESLP---- 1213

  Fly  1165 NQKD----EVPVCLETFVP 1179
              ||    :||    :|:|
plant  1214 --KDFPVPKVP----SFIP 1226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armiNP_647816.2 DEXXQc_Mov10L1 697..949 CDD:350836 83/403 (21%)
DNA2 <829..1148 CDD:440729 96/337 (28%)
AT4G30100NP_194739.1 DEXXQc_SETX 630..1011 CDD:438712 82/402 (20%)
AAA_12 988..1185 CDD:463780 67/242 (28%)

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