DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment armi and Zgrf1

DIOPT Version :9

Sequence 1:NP_001014556.1 Gene:armi / 38427 FlyBaseID:FBgn0041164 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_017175214.1 Gene:Zgrf1 / 71643 MGIID:1918893 Length:2044 Species:Mus musculus


Alignment Length:1215 Identity:235/1215 - (19%)
Similarity:427/1215 - (35%) Gaps:410/1215 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 NPNEINGVLSNKIA-ELTHGLSEMDVSKESSCTARKGVITSLDGDRGVIDKDVLFETKVAEDIIL 109
            ||.:.|....|::| |:|.||....||                                      
Mouse  1082 NPPQCNSTAPNRLASEVTEGLFAEAVS-------------------------------------- 1108

  Fly   110 DLHVGCVVEYLTFTTGEAMRVVKVKSILEHSWED-TSQKEIEKAVDNLKNEKPTFFNTETRSVLG 173
            .||.....|  :.::.:.:|:..:|.:|....:| .|:|:......|     .|....|..:|||
Mouse  1109 GLHFSHTSE--SESSVDPVRLQMIKGLLHQQQQDLVSRKQAFSLTLN-----QTCKTQEHETVLG 1166

  Fly   174 LISQRLASSIDVETEYGQLTVELDNIEMNFIPTNGDRVRLECNIQLDDGFVDKQGEILEVTKLFP 238
            ..:.:...:.|::        |::|.::.|  .||.::                     ::...|
Mouse  1167 SSASKNCRAKDLQ--------EINNSDLCF--PNGQKI---------------------ISAYLP 1200

  Fly   239 TRIQEGEKCIVERVYVHMVVLGPETYILKTDLPTGTDLHLGDIVLADLIECQYSKFTRRAIKITP 303
            .|          :|::..|...|..|   ..:.|.:.:...:|:|.:|.:..|...::..|....
Mouse  1201 QR----------QVHIPAVFQSPAHY---RQVFTASIIEHLNILLFELAQRLYKALSKVDISFYT 1252

  Fly   304 LEKNFGATKLTQQSSMGSSGS------GKAVTV--TGVNR---FITAE----------LWQKESV 347
            ..|.     .|.:|...:|.|      .|.|.|  .|.|:   |.|.:          .|.:|..
Mouse  1253 SSKG-----ETMRSGKNNSPSCHHNQPAKLVMVKKEGPNKGRLFYTCDKSKDNQCKFFKWLEEVT 1312

  Fly   348 SLKLTNNLNRTLRLESITVCNDSESQLSVVSPLESKEISSGSEITVT----FEIHTQFLGEAIEK 408
            ..:|..|.:     :|..|.||.:   |:.|.|.|:::....|..:.    |:...:..|     
Mouse  1313 PGQLPQNTS-----QSTMVFNDIK---SIGSYLRSQKVPVYEECQLLLRRGFDFQRKQCG----- 1364

  Fly   409 YVLNFDLLKVRRVFTV---IVCKTKEEVAEAEKRMIAAEALMAPGRNSQERSRFYA-NQVWCNKV 469
                    |::::.||   ...:||.::.....|              :|.|..|: ..:|    
Mouse  1365 --------KLKKLTTVNPDFYSETKSKIYLKLSR--------------RESSSVYSKGDLW---- 1403

  Fly   470 DVIPGQQIVTKR------RFVALRLGCFEVPKELRQICLTSERRQEMIKAIEQHYSFLTEPLSIK 528
                   :::|.      .|:|  ...|..|..:.::                      |.|.:|
Mouse  1404 -------VISKTLDFELDTFIA--CSAFFGPSSVNEV----------------------ELLPLK 1437

  Fly   529 TY----------MHRFRLLLHLEEIECFVNFRNYDRDRA-----HFLRDGEFLTLQIENLAERR- 577
            .|          :|...:.....|:....|.::|....|     :.|...:..|:..:|:::|: 
Mouse  1438 GYFPSNWPTNITVHALLVCNASTELTTLQNIQDYFNPAALPLMPYLLAMSQSATVSSKNISKRKF 1502

  Fly   578 --PSLV---------IGDTLRVINPWSDPDSQTTKSYEGIIHKVLFDRILLKFHSSFQEKYNGED 631
              |::.         :|.||::.                        |.|:..|           
Mouse  1503 IPPAITSIKTKTELHLGATLQLA------------------------RELINVH----------- 1532

  Fly   632 YRLEFYFSRYSFRKQHHAISKIVGVM---GEDFLFPSKVTKRENPQLDVYMKDDDMYLYDSKLEW 693
             ||.        :.|..|:.:|..:|   |.|                           :..||.
Mouse  1533 -RLN--------KDQATALIQIAQMMASQGSD---------------------------EDALEP 1561

  Fly   694 YNQSLNSIQKRAVFNILRGEAENIPY-VLFGPPGSGKTMTLIETLLQLVR-----------NLPG 746
            :..||                   |. |:.|..|:||:..|...:|.||.           |...
Mouse  1562 FGHSL-------------------PITVIHGVFGAGKSYLLAVVILFLVELFEKCDSGTVGNARP 1607

  Fly   747 ARILVGTPSNSSADLVTKRLIDSKALLQGDFIRLVSYNQVEKDLIPPEIMSYCATSDVGAVGSCE 811
            .::||.:.:|.:.|.|   |:...:|....|||:.|..::.|.::|..:.:          ||..
Mouse  1608 WKVLVSSSTNVAVDRV---LLGLLSLGFEKFIRVGSVRKIAKPVLPYSLHA----------GSDN 1659

  Fly   812 DKMMVTESGLKLR--------------CQAKFIGTHRITISTCTTLG-NFLQLGFPAGH---FTH 858
            :...:.|....|:              .:...:||:|:.:.....:| ......||..:   |..
Mouse  1660 ESEQLKELNALLKEELTPIERVYVRKSIEQHKLGTNRVLLKQVRVVGVTCAACAFPCLNDLKFPV 1724

  Fly   859 VLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQL-QSIVTSRIASKMGFSISFLERLLERSP 922
            |:.||..|.|||.:::||...  :..:::|.|||:|| .:|..|..|.:.|...:..:||...:.
Mouse  1725 VVLDECSQMTEPASLLPIARF--QCEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMAC 1787

  Fly   923 YRKDLQ---------RFPESSGYNPLVLTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRE 978
            ..|.||         ...:..|:.|::|..   .||..|:|.:|.:.|||:..|:..:||::  .
Mouse  1788 TSKMLQVTAGCRLCGWMKDEEGHKPVLLRT---QYRCHPAISAIANDLFYEGSLVNGISERE--R 1847

  Fly   979 SRLLSKLRCVFESEKDIPQAHGTFFYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTAD 1043
            |.:|..|..:             .||.:.|..:...:: |:.|..|......:..:|..:.|.:.
Mouse  1848 SPVLEWLPTL-------------CFYNVTGAEQVEREN-SFVNVAEATFTLKLIQSLMASGVESC 1898

  Fly  1044 QIGIITPYQKQVKMLRSMFIGTDVVMP-----KIGSVEEFQGQERDIILISTVRSSEEILRMDAR 1103
            .||:||.|:.|:..:.::....||..|     ::.:|:.|||.|::|.::|.||:.:        
Mouse  1899 MIGVITLYKSQMYKICNLLSAVDVGHPDVKAVQVSTVDAFQGAEKEITILSCVRTRQ-------- 1955

  Fly  1104 FSLGFVRCSKRLNVAVSRARAMMIIFGNPHLLAVDECWRQLILFC 1148
              :||:...||:|||::|.|..::|.|:...|..:..|.::|..|
Mouse  1956 --VGFIDSEKRMNVALTRGRRHLLIVGSLSCLRKNRLWGRVIQHC 1998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armiNP_001014556.1 AAA_11 698..902 CDD:289831 52/234 (22%)
AAA_19 720..768 CDD:289986 16/58 (28%)
DNA2 <840..1155 CDD:224037 86/328 (26%)
UvrD_C_2 909..1132 CDD:304668 59/236 (25%)
Zgrf1XP_017175214.1 DUF2439 3..75 CDD:371019
zf-GRF 1267..1311 CDD:284302 9/43 (21%)
TIGR00376 <1568..2003 CDD:273041 116/475 (24%)
AAA_12 1774..1981 CDD:372468 58/235 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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