Protein Alignment armi and dna2

DIOPT Version :9

• Sequence 1: NP_001014556.1
• Gene: armi / 38427
• FlyBaseID: FBgn0041164
• Length: 1188
• Species: Drosophila melanogaster
• Sequence 2: XP_021329958.1
• Gene: dna2 / 559535
• ZFINID: ZDB-GENE-090313-71
• Length: 1374
• Species: Danio rerio
• Alignment Length: 1373
• Identity: 279/1373 - (20%)
• Similarity: 468/1373 - (34%)
• Gaps: 461/1373 - (33%)

  Fly     3 TYVSKFFTNPDRNREDILESLDRENSFLDQKLMEEKMDQQLKANP----NE-INGVLSNKIAELT 62
            |....|..:|::..:  .||:..|.|             :|||.|    || :|| .|......:
Zfish   180 TLQKAFSKSPEKKIK--TESVSLEGS-------------RLKAGPCLKMNEKLNG-FSKDSGRSS 228

  Fly    63 HGLSEMDVSKESSCTARKGVITSLDGDRGVIDKDVLFETKVAEDIILDLHVGCVVEYLTFTTGEA 127
            |.||.....||:|.|..    ...:.|.|.:.....|:              .|:.|
Zfish   229 HHLSFSTSEKENSPTCN----VKSEADMGAVSGTNDFD--------------LVMSY-------- 267

  Fly   128 MRVVKVKSILEHSWEDTSQKEIEKAVDNLKNEKPTFFNTETRSVLGLISQRLASSIDVETEYGQL 192
                       .||......|          ||.||.|..           :|....:.|...|:
Zfish   268 -----------SSWIQNGSTE----------EKGTFLNCP-----------IAKKRPLNTSELQV 300

  Fly   193 TVELDNIEMNFIPTNGDRVRLECNIQLDDGFVDKQGEILEVTKLFPTRI-QEGEKCIVERVYV-- 254
            ..::.:.:...:|...|...|     :||.|.:...:..|..|  |.:. .|..|.|.|.|.:
Zfish   301 KEQIADGKTLPVPFEDDFADL-----MDDWFDEGMEQKSEAPK--PKKFSHEKNKGIPEHVVLAS 358

  Fly   255 -----------------------HMVVL------GPETYILK-----TDLPTGTDLHLGD----- 280
                                   |:.:.      ..||.|||     |.:..|..:||..
Zfish   359 GVHNRYWVLDVQDVTSSRSCSEKHLTITCSKTSQATETCILKDGWESTLVTVGDIIHLEGKCVSG 423

  Fly   281 -----------IVLADL----------IECQYSKFTRRAIKITPLEKNF-GATK----------L 313
                       |:|.||          |.|.     ||.: :..:.|.| |.:|          :
Zfish   424 LWTIDRDSAFLILLPDLLISGTSIASSIRCM-----RRGV-LGEMFKAFDGGSKQMLNGTIVHDI 482

  Fly   314 TQQSSMGSSGSGKAVTVTGVNRFITAEL----WQKESVSLKLTN-NLNRTLR--LESI------- 364
            .|:::|.|..|.:.     :..|.|..|    :..:..|||||. ::.:.:.  |.||
Zfish   483 FQKAAMSSDFSSEK-----IQTFATEALRSPNYLGQMYSLKLTQADMRQEVEEYLPSISEWAKQY 542

  Fly   365 --TVCNDSESQLSVVSPLE---SKEISSGS------------------------EITVTFEIHTQ 400
              |.....:.||::..|.:   ||:.:|.|                        ::|...:||.:
Zfish   543 LHTSPQAGQKQLTLKLPSDGALSKQDASSSVMVTDFVDIEENIWCPRFGLKGKIDVTAGVKIHRR 607

  Fly   401 FLGEAIEKYVLNFDLLKVRRVFTVIVCKTKEEVAEAEKR-MIAAEALMAPGRNSQERSRF----- 459
              |....:.::..:|            ||.:|....|.| .:....||:..|.....:.|
Zfish   608 --GRKPMERIVPLEL------------KTGKESNSIEHRSQVILYTLMSSARRCDPEAGFLVYLK 658

  Fly   460 -----------------------YANQVWCNKVDVIPGQQIVTKRRFVALRLGCFEVPK------ 495
                                   .|:.:..|.:.|....|:......|:.:..|...|:
Zfish   659 TGSLHPVVGNHMDRRELIKIRNSLAHHIGNNLIKVDGKSQMAQLPAIVSDQQTCKYCPQKRNCAI 723

  Fly   496 -----ELRQICLTSERRQEMIKAIEQHYSFLTEPLSIKTYMHRFRLLLHLEEIE----------- 544
                 |...:...||..|..:::..:|.|    .:.::.:.| :.||..||.:.
Zfish   724 YNRAVERDPVEKCSENPQAFVQSESEHLS----QVHLQYFSH-WLLLCSLEALTMENKGGRRNIW 783

  Fly   545 ------------CFVNFRNYDRDRAHFLRDGEFLTLQIENLAERR------PSLVIGDTLRVINP 591
                        |..|.|.  ......|.||.:     ::..||:      ..|::||.:.|
Zfish   784 LQTAQQREKIGGCAGNMRL--AGGVSILSDGVY-----KHSFERKEGEQTLTGLIVGDRIVV--- 838

  Fly   592 WSDPDSQTTKSYEGIIHKVLFDRILLKFHSSFQEKYNGEDYRLEFYFSRYSFRKQHH----AISK 652
             ||.||.......|.:.::..:|:....           |..|..|.|...||....    .:|.
Zfish   839 -SDQDSVLIGLSTGYVTEIAVNRVTCSL-----------DKNLSKYSSNTVFRLDQDEGAGGLST 891

  Fly   653 IVGVMGEDFLFPSKVTKRENPQLDVYMKDDDMYLYDSKLEWYNQSLNSI----QKRAVFNILRG- 712
            .:|.:  ..|..:..|.....:|.|..:...          :..||:|:    .|..|.|||:|
Zfish   892 HLGNL--SMLMENTPTSERLRELIVEFRPPQ----------FIDSLSSVLPRDAKDIVSNILKGL 944

  Fly   713 ---EAENIPYVLF--------GPPGSGKTMTLIETLLQLVRNLPGARILVGTPSNSSADLVTKRL 766
               :.:.:..||.        |.||:|||.|:. ||:::: :..|..:|:.:.::|:.|.:..:|
Zfish   945 NKPQKQAMKKVLLSKDYTLIVGMPGTGKTTTIC-TLVRIL-HACGFSVLLTSYTHSAVDNILLKL 1007

  Fly   767 IDSKALLQGDFIRLVSYNQVEKDLIPPEIMSYCATSDVGAVGSCEDKMMVTESGLKLRCQAKFIG 831
            ...|.    .|:||....:|..:::|                       .||..    |:||.|.
Zfish  1008 KRFKI----GFLRLGRPQKVHHEILP-----------------------FTEEA----CRAKGIQ 1041

  Fly   832 T----------HRITISTCTTLGNFLQLGFPAGHFTHVLFDEAGQCTEPETMVPIVMLTKKRSQV 886
            |          ..|..:||..:.:.:   |....|...:.|||.|.::|..:.|:..    ..:.
Zfish  1042 TLEELEQLYSRELIVATTCMGVKHPI---FSRRRFDFCIVDEASQISQPVCIGPLFY----AQRF 1099

  Fly   887 VLSGDPRQLQSIVTSRIASKMGFSISFLERLLERSPYRKDLQRFPESSGYNPLVLTKLLYNYRAL 951
            ||.||.:||..||.:..|..:|..    |.|.:|..:.:|             .:.:|...||..
Zfish  1100 VLVGDHQQLPPIVQNAEARSLGMD----ESLFKRLEHHRD-------------AVVQLNVQYRMN 1147

  Fly   952 PSIMSIYSRLFYDDELIPVLSEKDSRESRLLSKLRCVFESEKDI----PQAHGTFFYGIIGENRQ 1012
            .:|||:.:.|.|:..| ...|||.:.....|.. |...|.|.::    ||      |....:...
Zfish  1148 SAIMSLSNALMYEGRL-ECGSEKTANAVLQLPS-RAQAEEELELYVCQPQ------YSAWVQAAL 1204

  Fly  1013 NNDSPSWF------------------NPQEVREVFLMTIALYRANVTADQIGIITPYQKQVKMLR 1059
            ..:||..|                  |..|...|..:...|.:|...|..||:|.||::|:|::.
Zfish  1205 EPNSPVCFLDTSEVPAPETVEKSGISNHTEAVLVQGLVTLLLKAGCRACDIGVIAPYRQQLKVIS 1269

  Fly  1060 SMFIGTDVVMPKIGSVEEFQGQERDIILISTVRSSEEILRMDARFSLG-FVRCSKRLNVAVSRAR 1123
            |:..|......::.:|:::||:::.:|::|.|||       :|..:|| .::..:|||||::||:
Zfish  1270 SLLQGDAFKALEVNTVDKYQGRDKSVIIVSFVRS-------NAEGNLGELLQDWRRLNVAITRAK 1327

  Fly  1124 AMMIIFGN 1131
            ..:::.|:
Zfish  1328 HKLLMLGS 1335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
armi	NP_001014556.1	AAA_11	698..902	CDD:289831	56/229 (24%)
		AAA_19	720..768	CDD:289986	16/55 (29%)
		DNA2	<840..1155	CDD:224037	79/315 (25%)
		UvrD_C_2	909..1132	CDD:304668	60/246 (24%)
dna2	XP_021329958.1	Dna2	391..602	CDD:312281	45/221 (20%)
		Cas4_I-A_I-B_I-C_I-D_II-B	<579..721	CDD:321087	21/155 (14%)
		AAA_11	788..1354	CDD:331082	149/654 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910