DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment armi and helz

DIOPT Version :10

Sequence 1:NP_647816.2 Gene:armi / 38427 FlyBaseID:FBgn0041164 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_021325743.1 Gene:helz / 406550 ZFINID:ZDB-GENE-040426-2419 Length:1864 Species:Danio rerio


Alignment Length:907 Identity:212/907 - (23%)
Similarity:349/907 - (38%) Gaps:239/907 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 LESITVCNDSESQLSVVSPLE--------SKEISSGSEITVTFEIHTQFLGEAIEKYVLNFDL-- 415
            ||...||.....:.|..||::        :.||:..:||..||            :..:.|||  
Zfish   310 LEPQPVCPGGCQEWSAASPVQNGMDHCIYTVEIAFSTEIFGTF------------RQTVVFDLGC 362

  Fly   416 --LKVRRVFTVIVCKTKEEVAEAEKRMIAAEALMAPGRNSQERSRFYANQVW---CNK-VDVIPG 474
              :.::||..     ....:.:.|..:.|.:.|:...:.            |   |.. |:.:|.
Zfish   363 EPVLMQRVMV-----DAASIEDLEHLLQARQQLLMTAKR------------WDSSCKTIVEFVPN 410

  Fly   475 QQIVTKRRFVALRLGCFEVPKELRQICLTSERRQEMIKAIEQHYSFLTEPLSIKTYMHRFRLLLH 539
            :.:..:|..    |..:::|....|:..               .|.|.:.|:...|..|...||:
Zfish   411 ENMDLERSL----LTRYQIPLSADQLFT---------------QSVLDKTLTRDNYQPRLHDLLY 456

  Fly   540 LEEIECFVNFRNYD----------------RDRAHFLRDGEFL-------TLQIENLAERRPSLV 581
            :|||..:.....::                ...|.:.::|:..       ||..:.||.|.....
Zfish   457 IEEIAQYKEVSKFNIKVNLQLVTSFMLTGISGGAKYAQNGQLFARFKLTETLSEDTLAGRLVMTK 521

  Fly   582 IGDTLRVINP-------WSDPDSQTTKSYEGIIHKVLFDRILLKFHS---------SFQEKYNGE 630
            :...|  :.|       .:.|.....:.||.:|.:...|.|.|:...         :.||.    
Zfish   522 VNSVL--LLPVFKERMGQNQPAGAKERVYEALIEEKTKDYIFLRVCKECCDELGLVADQEL---- 580

  Fly   631 DYRLEFYFSRYSFRKQHHAISKIVGVMGEDFLFPS-----KVTKRENPQLDVYMKDDDMYLYDSK 690
            ...|:|..:|....:.|:|:.:   |.....|||.     .:....|.|.|              
Zfish   581 QVELQFQLNRLPLCEMHYALDR---VRDNSILFPDISLTPTIPWSPNRQWD-------------- 628

  Fly   691 LEWYNQSLNSIQKRAVFNILRGEAENIPYVL-FGPPGSGKTMTLIETLLQLVRNLPGARILVGTP 754
             |..:..||:.||.|:..|....:.|:|.|| .||.|:|||.||.:.:..:::. |.:|:|:.|.
Zfish   629 -EQLDPRLNAKQKEAILAITTPLSINLPPVLIIGPYGTGKTFTLAQAVKHILKQ-PESRVLICTH 691

  Fly   755 SNSSADLVTKRLIDSKALLQGDF--------------IRLVSYNQVEKDLIPPEIMSYCATSDVG 805
            |||:|||..|           |:              :|:...|:..| .:.|.:..||..|   
Zfish   692 SNSAADLYIK-----------DYLHPYVEAGNPHARPLRVYFRNRWVK-TVHPLVQQYCLIS--- 741

  Fly   806 AVGSCEDKMMVTESGLKLRCQAKFIGTHRITISTCTTLGNFLQLGFPAGHFTHVLFDEAGQCTEP 870
              |:.....|.|...::         .||:.:.|.:|.....||....|.|||:|.|||.|..|.
Zfish   742 --GAHFTFQMPTRQDVE---------RHRVVVVTLSTSQYLCQLDLEPGIFTHILLDEAAQAMEC 795

  Fly   871 ETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERLLERSPYRKDLQRFPESSG 935
            ||::|:. |..|.::|||:||..||...|.|..|.:....:|.|:||.|..|           |.
Zfish   796 ETIMPLA-LAVKSTRVVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHYP-----------SE 848

  Fly   936 YNPLVLTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESRLLSKLRCVFESEKDIPQAHG 1000
            |...:|  |..|||:..:|::..|.|||:.:|:                     .|.|..|  |.
Zfish   849 YPCRIL--LCENYRSHEAIINYTSDLFYEGKLM---------------------ASGKQPP--HK 888

  Fly  1001 TF----FYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYR------ANVTADQIGIITPYQKQV 1055
            .|    |:...||:.|..:|.:::|..||.|:......:.:      ..:....||:::||..||
Zfish   889 DFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEEMRKKWPVSWGKLEEGSIGVVSPYADQV 953

  Fly  1056 KMLRSMFIGTDVVMPKIGSVEEFQGQERDIILISTVRS------------SEEILRMDARFSL-- 1106
            ..:|:......:....:..|...||::..::.:||||:            .:|.|..|:...|  
Zfish   954 FRIRAELRKKRMSEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKRKEQLVEDSTEDLDY 1018

  Fly  1107 GFVRCSKRLNVAVSRARAMMIIFGNP-HLLAVDEC---WRQLILFCVKNNAYFGCDLPQMVI 1164
            ||:...|.||.|::||::::.:.|:| .|.:|..|   |...|..|.:|::..|....|:.|
Zfish  1019 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWETFISICHENHSLHGITFEQIKI 1080

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armiNP_647816.2 DEXXQc_Mov10L1 697..949 CDD:350836 82/266 (31%)
DNA2 <829..1148 CDD:440729 97/346 (28%)
helzXP_021325743.1 zf-CCCH 171..195 CDD:459885
DEXXQc_HELZ 634..860 CDD:350835 82/266 (31%)
DNA2 <756..1044 CDD:440729 91/333 (27%)
Med15 <1337..>1649 CDD:312941
PHA03247 <1473..1835 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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