DRSC/TRiP Functional Genomics Resources

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Protein Alignment armi and IGHMBP2

DIOPT Version :10

Sequence 1:NP_647816.2 Gene:armi / 38427 FlyBaseID:FBgn0041164 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_002171.2 Gene:IGHMBP2 / 3508 HGNCID:5542 Length:993 Species:Homo sapiens


Alignment Length:655 Identity:165/655 - (25%)
Similarity:275/655 - (41%) Gaps:153/655 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   579 SLVIGDTLRVINPWSDPDSQTTKSYEGIIHKVLFDRILLKFHSS--FQEKYNGED-YRLEFYFSR 640
            |...||.:.:.    |..::.::...||:.:|....:.:.|..|  ||...:.|: |||....:.
Human    82 SFTSGDIVGLY----DAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDRENSYRLLKLAND 142

  Fly   641 YSFR---------KQHHA--ISKIVGVMGEDFLF----PSKVTKRENPQLDVYMKDDDMYLYDSK 690
            .::|         |::|:  .|.::.|     ||    ||       |..:::           .
Human   143 VTYRRLKKALIALKKYHSGPASSLIEV-----LFGRSAPS-------PASEIH-----------P 184

  Fly   691 LEWYNQSLNSIQKRAV-FNILRGEAENIPYVLFGPPGSGKTMTLIETLLQLVRNLPGARILVGTP 754
            |.::|..|::.||.|| |.:.:.|..    ::.||||:|||.|::|.:||.|:.  |.::|...|
Human   185 LTFFNTCLDTSQKEAVLFALSQKELA----IIHGPPGTGKTTTVVEIILQAVKQ--GLKVLCCAP 243

  Fly   755 SNSSADLVTKRLIDSK-----------------------ALLQGDFIRLVSYNQVEKDLIPPEIM 796
            ||.:.|.:.:||...|                       .|.:.|..::|:  .:.|| |....:
Human   244 SNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVA--DIRKD-IDQVFV 305

  Fly   797 SYCATSDVGAVGSCEDKMMVTESGLKLRCQA---KFIGTHRITISTCT--TLGNFLQLGFPAGHF 856
            ....|.|.....:..:::.:....||.|.:|   :.:.:..:.::|.|  :....|:| .|..:|
Human   306 KNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADGPLKL-LPESYF 369

  Fly   857 THVLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERLLERS 921
            ..|:.||..|..|....:|::    |..:.:|:||.:||.....|..|:..|.|:|.:|||.|. 
Human   370 DVVVIDECAQALEASCWIPLL----KARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEE- 429

  Fly   922 PYRKDLQRFPESSGYNPLVLTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESRLLSKLR 986
                          |...|:..|...||...:||...|...|    :..|:...|....||..|.
Human   430 --------------YGARVVRTLTVQYRMHQAIMRWASDTMY----LGQLTAHSSVARHLLRDLP 476

  Fly   987 CVFESEK-DIP----QAHGTFFYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTADQIG 1046
            .|..:|: .:|    ...|...:.:..|:.|:..     ||.|||.|.|...||..|.|.|..|.
Human   477 GVAATEETGVPLLLVDTAGCGLFELEEEDEQSKG-----NPGEVRLVSLHIQALVDAGVPARDIA 536

  Fly  1047 IITPYQKQVKMLRSMFIGTDVVMPKIGSVEEFQGQERDIILISTVRSSEEILRMDARFSLGFVRC 1111
            :::||..||.:||...:.....: :|.||:.|||:|::.:::|.|||:.       :..:||:..
Human   537 VVSPYNLQVDLLRQSLVHRHPEL-EIKSVDGFQGREKEAVILSFVRSNR-------KGEVGFLAE 593

  Fly  1112 SKRLNVAVSRARAMMIIFGNPHLLAVDECWRQLILFC----VKNNAYFGCDLPQMV--INQKDEV 1170
            .:|:||||:|||                  |.:.:.|    |.|:|:    |..:|  ..|..||
Human   594 DRRINVAVTRAR------------------RHVAVICDSRTVNNHAF----LKTLVEYFTQHGEV 636

  Fly  1171 PVCLE 1175
            ....|
Human   637 RTAFE 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armiNP_647816.2 DEXXQc_Mov10L1 697..949 CDD:350836 70/280 (25%)
DNA2 <829..1148 CDD:440729 88/325 (27%)
IGHMBP2NP_002171.2 TIGR00376 19..641 CDD:273041 164/653 (25%)
SS DNA-binding. /evidence=ECO:0000269|PubMed:8349627, ECO:0000305|PubMed:22999958 638..785 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 651..723
R3H_Smubp-2_like 726..784 CDD:100070
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 782..828
PRK12438 <786..845 CDD:171499
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 841..879
Nuclear localization signal. /evidence=ECO:0000255 864..868
ZnF_AN1 902..937 CDD:197545
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 971..993
Blue background indicates that the domain is not in the aligned region.

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