DRSC/TRiP Functional Genomics Resources

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Protein Alignment armi and IGHMBP2

DIOPT Version :9

Sequence 1:NP_001014556.1 Gene:armi / 38427 FlyBaseID:FBgn0041164 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_002171.2 Gene:IGHMBP2 / 3508 HGNCID:5542 Length:993 Species:Homo sapiens


Alignment Length:655 Identity:165/655 - (25%)
Similarity:275/655 - (41%) Gaps:153/655 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   579 SLVIGDTLRVINPWSDPDSQTTKSYEGIIHKVLFDRILLKFHSS--FQEKYNGED-YRLEFYFSR 640
            |...||.:.:.    |..::.::...||:.:|....:.:.|..|  ||...:.|: |||....:.
Human    82 SFTSGDIVGLY----DAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDRENSYRLLKLAND 142

  Fly   641 YSFR---------KQHHA--ISKIVGVMGEDFLF----PSKVTKRENPQLDVYMKDDDMYLYDSK 690
            .::|         |::|:  .|.::.|     ||    ||       |..:::           .
Human   143 VTYRRLKKALIALKKYHSGPASSLIEV-----LFGRSAPS-------PASEIH-----------P 184

  Fly   691 LEWYNQSLNSIQKRAV-FNILRGEAENIPYVLFGPPGSGKTMTLIETLLQLVRNLPGARILVGTP 754
            |.::|..|::.||.|| |.:.:.|..    ::.||||:|||.|::|.:||.|:.  |.::|...|
Human   185 LTFFNTCLDTSQKEAVLFALSQKELA----IIHGPPGTGKTTTVVEIILQAVKQ--GLKVLCCAP 243

  Fly   755 SNSSADLVTKRLIDSK-----------------------ALLQGDFIRLVSYNQVEKDLIPPEIM 796
            ||.:.|.:.:||...|                       .|.:.|..::|:  .:.|| |....:
Human   244 SNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVA--DIRKD-IDQVFV 305

  Fly   797 SYCATSDVGAVGSCEDKMMVTESGLKLRCQA---KFIGTHRITISTCT--TLGNFLQLGFPAGHF 856
            ....|.|.....:..:::.:....||.|.:|   :.:.:..:.::|.|  :....|:| .|..:|
Human   306 KNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADGPLKL-LPESYF 369

  Fly   857 THVLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERLLERS 921
            ..|:.||..|..|....:|::    |..:.:|:||.:||.....|..|:..|.|:|.:|||.|. 
Human   370 DVVVIDECAQALEASCWIPLL----KARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEE- 429

  Fly   922 PYRKDLQRFPESSGYNPLVLTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESRLLSKLR 986
                          |...|:..|...||...:||...|...|    :..|:...|....||..|.
Human   430 --------------YGARVVRTLTVQYRMHQAIMRWASDTMY----LGQLTAHSSVARHLLRDLP 476

  Fly   987 CVFESEK-DIP----QAHGTFFYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTADQIG 1046
            .|..:|: .:|    ...|...:.:..|:.|:..     ||.|||.|.|...||..|.|.|..|.
Human   477 GVAATEETGVPLLLVDTAGCGLFELEEEDEQSKG-----NPGEVRLVSLHIQALVDAGVPARDIA 536

  Fly  1047 IITPYQKQVKMLRSMFIGTDVVMPKIGSVEEFQGQERDIILISTVRSSEEILRMDARFSLGFVRC 1111
            :::||..||.:||...:.....: :|.||:.|||:|::.:::|.|||:.       :..:||:..
Human   537 VVSPYNLQVDLLRQSLVHRHPEL-EIKSVDGFQGREKEAVILSFVRSNR-------KGEVGFLAE 593

  Fly  1112 SKRLNVAVSRARAMMIIFGNPHLLAVDECWRQLILFC----VKNNAYFGCDLPQMV--INQKDEV 1170
            .:|:||||:|||                  |.:.:.|    |.|:|:    |..:|  ..|..||
Human   594 DRRINVAVTRAR------------------RHVAVICDSRTVNNHAF----LKTLVEYFTQHGEV 636

  Fly  1171 PVCLE 1175
            ....|
Human   637 RTAFE 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armiNP_001014556.1 AAA_11 698..902 CDD:289831 58/232 (25%)
AAA_19 720..768 CDD:289986 20/47 (43%)
DNA2 <840..1155 CDD:224037 91/325 (28%)
UvrD_C_2 909..1132 CDD:304668 66/227 (29%)
IGHMBP2NP_002171.2 TIGR00376 19..641 CDD:273041 164/653 (25%)
AAA_19 198..256 CDD:289986 23/63 (37%)
AAA_12 418..615 CDD:289832 68/246 (28%)
SS DNA-binding. /evidence=ECO:0000250 638..785 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 651..723
R3H_Smubp-2_like 726..784 CDD:100070
DUF3628 <766..850 CDD:289100
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 782..828
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 841..879
Nuclear localization signal. /evidence=ECO:0000255 864..868
zf-AN1 897..934 CDD:279736
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 971..993
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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