DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment armi and Mov10l1

DIOPT Version :9

Sequence 1:NP_001014556.1 Gene:armi / 38427 FlyBaseID:FBgn0041164 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_017450774.2 Gene:Mov10l1 / 300141 RGDID:1304735 Length:1291 Species:Rattus norvegicus


Alignment Length:1360 Identity:356/1360 - (26%)
Similarity:564/1360 - (41%) Gaps:370/1360 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LSEMDVSKESSCTARKGVITSLDGDRGVIDKDVLFETKVAEDIILDLHVG----CVVEYLTFTTG 125
            |||.|...::.    :||:|....|.|:||..:.|........:| |:||    .|||....:.|
  Rat    30 LSEGDTRLKTV----QGVVTRYCSDYGMIDDLIYFSNDAVTSKVL-LNVGQEVIAVVEENKVSNG 89

  Fly   126 EAMRVVKVKSILEHSWEDTSQKEIEKAVDNLKNEKPTFFNTETRSVLGLISQRLASSIDV-ETEY 189
              ::.::|:::.: .|||          || :|......::..|.::|.::..|..:..: :|.|
  Rat    90 --LKAIRVEAVSD-KWED----------DN-RNSSKGLSDSSPRVLIGCVTSMLEGAGYISQTTY 140

  Fly   190 GQLTVELDNIEMNFIPTNGDRVRLECNIQLDDGFVDKQGEILEVTKLFPTRIQE-------GEKC 247
                ..|:::...|.|..||.|..|..|:....    ..|.:.|..|...|:.:       |...
  Rat   141 ----FSLESVCEGFHPCKGDWVEAEYWIRPGTW----SSEAISVKPLRYKRVDKVCISSLCGRNG 197

  Fly   248 IVERVYVHMVVLGPETYILKTD---LPTGTDLHLGDIVLADLIECQYSKFTRRAIKITPLE---- 305
            ::|           ::.....|   ||.|......|||.|.::|...|.:..||:.:||::    
  Rat   198 VIE-----------DSIFFSLDSLKLPEGYTPRRHDIVNAVVVESSQSCYIWRALCMTPVKREAI 251

  Fly   306 --------------KNFGATKLTQQSSMGS--SGSGKAVTVTGVNR------FITAEL--WQK-- 344
                          ||.|..::|:.:|.|:  .|..|||.:...|:      .::..|  |.|  
  Rat   252 IGEAPQEPYGALLLKNKGDVEVTRTTSFGTLKEGESKAVVIWIENKGEISQDLVSCRLAGWDKAH 316

  Fly   345 ------------------------ESVSLKLTNNLNRTLRLESITVCNDSESQLSVVSP------ 379
                                    |:|     |:||.....:...:...|....:.:||      
  Rat   317 QFRFEAQGRGQACAGVAAVAVSEGENV-----NSLNHHREDKPDPIPESSLENNTEISPDGCACT 376

  Fly   380 LESKE---------------ISSGSEITVTFEIHTQFLGEAIEKYVLNFDLLKVRRVFTVIVCKT 429
            .||:|               |..|.:.::....:.:..|...|..:|.|....:.|...|.|..:
  Rat   377 EESREKGDTAEKQEPEPGGLIPPGEKTSIVVTCNAKNPGRCKELLLLCFSNFLIGRHLEVNVVSS 441

  Fly   430 KEEVAEAEKRMIAAEALMAPGRNSQERSRFYANQVWCNKVDVIPGQQIVTKRRFVALRLGCFEVP 494
            :|          |..|:..|....:.:|   :..:...|..|:...|....||.:...|..:.:|
  Rat   442 EE----------ALIAVREPFSWKKPKS---SQTIVSAKTTVVVTTQKRNSRRQLPSFLPQYPIP 493

  Fly   495 KELRQICLTSERRQEMIKAIEQHYSFLT------EPLSIKTYMHRFRLLLHLEEIECFVNFRNYD 553
            ..|:             |.:||....||      |.|::..|..:|..||.||||...:..:.|:
  Rat   494 DRLK-------------KCVEQKIDILTFQPLLAELLNMSNYKEKFSTLLWLEEIHAEIELKEYN 545

  Fly   554 RDRAHFLRDGEFLTLQIENLAERRPSLVIGDTLRVINPWSDPDSQTTKSYEGIIHKVLFDRILLK 618
            .......|.||.|.|::..|||.||||..||.| ::.  |...:.....|.|.:.::..:.:.||
  Rat   546 MSGVVLKRKGELLVLEVPGLAESRPSLYAGDKL-ILK--SQEYNGHVIEYIGYVMEIHEEDVTLK 607

  Fly   619 FHSSFQEKYNGEDYRLEFYFSRYSFRKQHHAISKIVGVMGEDFLFP------------------- 664
            .:..|::.||.|...:||.::|.:.|:.|:|:.:::. :|...|||                   
  Rat   608 LNPGFEQMYNFEPMDVEFTYNRTTSRRCHYALEQVIH-LGVKVLFPEEIILQSPQVTGNWSLAQD 671

  Fly   665 -----------------------------------------SKVTKRENPQLDVYMKDDDMYLYD 688
                                                     :||||.:...:....|:|...:..
  Rat   672 TKSDGQSITKVTRNDGQSITNITKNDGQSITNITKNDGQSITKVTKNDGQSITNITKNDGQSITS 736

  Fly   689 ------------------------------------------SKL-------------------- 691
                                                      ||:                    
  Rat   737 ITKNGGQSINKVTRNDGQSITNITRNDGQSITKVTKNGGQSISKVTRNDGQSITKNKKTVKDQTK 801

  Fly   692 -----------------------------------EWYNQSLNSIQKRAVFNILRGEAENIPYVL 721
                                               |::|..||..||.||..||.|:...:||:|
  Rat   802 NTTKERHLSTTDQPEKTASTAETMDEIQIPRARDKEFFNPVLNENQKLAVRRILSGDCRPLPYIL 866

  Fly   722 FGPPGSGKTMTLIETLLQLVRNLPGARILVGTPSNSSADLVTKRLIDSKALLQGDFIRLVSYNQV 786
            |||||:|||:|:||.:||:...||.:||||..||||:||||..||.:||.|.....:|:.:..:.
  Rat   867 FGPPGTGKTVTIIEAVLQVHYALPDSRILVCAPSNSAADLVCLRLHESKVLKPAAMVRVNATCRF 931

  Fly   787 EKDLIPPEIMSYCATSDVGAVGSCEDKMMVTESGLKLRCQAKFIGTHRITISTCTTLGNFLQLGF 851
            |:.:| ..|..||                  ..|..:...::|    ||.|:||::.|.|.|:|.
  Rat   932 EETII-EAIKPYC------------------RDGEDIWRASRF----RIIITTCSSAGLFYQIGV 973

  Fly   852 PAGHFTHVLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLER 916
            ..|:||||..|||||.:|||.::|:.:::....|:||:|||.||..::.||:|...|.::|.|||
  Rat   974 RVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGDPMQLGPVIKSRLAMAYGLNVSMLER 1038

  Fly   917 LLERSPYRKDLQRFPESSGYNPLV--------LTKLLYNYRALPSIMSIYSRLFYDDELIPVLSE 973
            |:.|..|.:|...|.....||||:        :|||:.|||:..:::::.|||||..||      
  Rat  1039 LMSRPAYLRDENAFGACGAYNPLLPLPASSPQVTKLVKNYRSHSALLALPSRLFYHREL------ 1097

  Fly   974 KDSRESRLLSKLRCVFESEKDIPQAHGTFFYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYR- 1037
            :...:.::::.|   ...||...:.....|:|:.|...:...|||||:|.|..:|......|.| 
  Rat  1098 EVCADPKVVTSL---LGWEKLPRKGFPLIFHGVRGNEAREGRSPSWFSPAEAVQVMRYCCLLARN 1159

  Fly  1038 --ANVTADQIGIITPYQKQVKMLRSMFIGTDVVMPKIGSVEEFQGQERDIILISTVRSSEEILRM 1100
              :.|::..||:||||:|||:.::.:....|:...|:||||||||||..:|:||||||:|:... 
  Rat  1160 VSSQVSSKDIGVITPYRKQVEKIKILLRNVDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFE- 1223

  Fly  1101 DARFSLGFVRCSKRLNVAVSRARAMMIIFGNPHLLAVDECWRQLILFCVKNNAYFGCDLP 1160
            |.|:.|||:..|||.|||::|.:|::|:.||||:|..|.|:..|:.:.|.|..|.|||||
  Rat  1224 DDRYFLGFLSNSKRFNVAITRPKALLIVLGNPHVLVRDPCFGALLEYSVTNGVYTGCDLP 1283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armiNP_001014556.1 AAA_11 698..902 CDD:289831 83/203 (41%)
AAA_19 720..768 CDD:289986 30/47 (64%)
DNA2 <840..1155 CDD:224037 127/325 (39%)
UvrD_C_2 909..1132 CDD:304668 87/233 (37%)
Mov10l1XP_017450774.2 PRK08581 657..>833 CDD:236304 8/175 (5%)
DEXXQc_Mov10L1 842..1079 CDD:350836 104/259 (40%)
SF1_C_Upf1 1080..1270 CDD:350195 75/199 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 144 1.000 Domainoid score I4492
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 423 1.000 Inparanoid score I1717
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D148890at33208
OrthoFinder 1 1.000 - - FOG0000219
OrthoInspector 1 1.000 - - otm46155
orthoMCL 1 0.900 - - OOG6_101029
Panther 1 1.100 - - LDO PTHR10887
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1732
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.970

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