DRSC/TRiP Functional Genomics Resources

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Protein Alignment armi and Y53F4B.10

DIOPT Version :9

Sequence 1:NP_001014556.1 Gene:armi / 38427 FlyBaseID:FBgn0041164 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001366964.1 Gene:Y53F4B.10 / 190212 WormBaseID:WBGene00013157 Length:471 Species:Caenorhabditis elegans


Alignment Length:552 Identity:102/552 - (18%)
Similarity:190/552 - (34%) Gaps:163/552 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 KLTNNLNRTLRLESITVCNDSESQLSVVS-PLESKEISSGSEI-TVTFEIHTQFLGE-------- 404
            ||...||....::||| ...||.:|..|| |:.||.:.:..|. |::.::....|.:        
 Worm    19 KLLRGLNSDNNIQSIT-HKVSEMKLDTVSVPVNSKFVPNNLESKTISAKLKDPILSDRHPFEDYY 82

  Fly   405 ------------AIEKYVLNFDLLKVRRVFTVIVCKTKEEVAEAEKRMIAAEALMAPGR------ 451
                        .:::.:||.:|..::..        :.|.....|:         |||      
 Worm    83 HDQQNVEQNSENPVKRLLLNTNLDDIQAF--------RNETIPCMKK---------PGRCHMRIP 130

  Fly   452 -NSQERSRFYANQVWCNKVDVIPGQQIVTKRRFVALRLGCFEVPKELRQICLTSERRQEMIKAIE 515
             :||.....:    :|......|....|..:...:|:  ||.|.||     |.::.|.::..|..
 Worm   131 ADSQRPPLSF----FCGAKPSQPYALYVVAQGGTSLK--CFSVFKE-----LPADDRPDLFSADL 184

  Fly   516 QHYSF--LTEPLS-IKTYMHRFRLLLHLEEIECFVNFRNYDRDRAHFLRDGEFLTLQIENL---- 573
            ..:|:  |:|..: :..::....:::...|:...|...:|.||..|.|:........||..    
 Worm   185 SCFSYDILSERQAVVSDFLIGDLIIVFSLEVRYGVPPDSYLRDSTHVLKLESHKYWSIEKFAVVQ 249

  Fly   574 -----------------AERRPSLVIGDTLRVINPWSDPDSQTTKSYEGIIHKVLFDRILLKFHS 621
                             |::|..||    ..::.|.:.|.....:|..|::...|.........|
 Worm   250 RCVTQPEPFSVHQSHFKADKRLILV----NNILTPLTVPTKLLGESCRGVVRAFLPQAAPGLTLS 310

  Fly   622 SFQEKYNGEDYRLEFYFSRYSFRKQHHAISKIVGVMGEDFLFPSKVTKRENPQ-LDVYMKDDDMY 685
            |.:.....|:.|          |:..|        :|..:       :..:|| ||:.:.|:   
 Worm   311 SLKPGVLYEEVR----------RRTAH--------LGSHW-------EAMSPQVLDLEVVDN--- 347

  Fly   686 LYDSKLEWYNQSLNSIQKRAVFNILRGEAENIPYVLFGPPGSGKTMTLIETLLQLVRNLPGARIL 750
                         .|:..|.|...:....|.|. .|:...|:..|.  :|.:...:|.:. .:..
 Worm   348 -------------GSMLSRLVEECIDVNTEAIA-TLYEDRGTHPTK--VEKVTCGLRTVT-IQFT 395

  Fly   751 VGTPSNSSADLVTKRLIDSKALLQ---GDFIRLVSYNQVEKDLIPPEIMSYCATSDVGAVGSCED 812
            :||||.|:|  :.|....::..|:   ||.:.::..|.:                      ..:.
 Worm   396 IGTPSYSAA--IRKWKKGTRCSLETAAGDILSVLVENAI----------------------PLKS 436

  Fly   813 KMMVTESGLKLRCQAK----FIGTHRITISTC 840
            ::::|.|.:|.|...:    .:|.|.|....|
 Worm   437 RVIITASIIKSRVDVRILNTLLGQHVIINQDC 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armiNP_001014556.1 AAA_11 698..902 CDD:289831 29/150 (19%)
AAA_19 720..768 CDD:289986 12/47 (26%)
DNA2 <840..1155 CDD:224037 1/1 (100%)
UvrD_C_2 909..1132 CDD:304668
Y53F4B.10NP_001366964.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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