DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment armi and DNA2

DIOPT Version :9

Sequence 1:NP_001014556.1 Gene:armi / 38427 FlyBaseID:FBgn0041164 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_006717743.1 Gene:DNA2 / 1763 HGNCID:2939 Length:1090 Species:Homo sapiens


Alignment Length:1190 Identity:244/1190 - (20%)
Similarity:441/1190 - (37%) Gaps:361/1190 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LSNKIAELTHGLSEMDVSKESSCT--ARKGVITSLDG----DRGVIDKD---------------- 96
            |.||         |:.:.:...|:  ...|.|..|:|    |..:||||                
Human   104 LENK---------ELCILRNDWCSVPVEPGDIIHLEGDCTSDTWIIDKDFGYLILYPDMLISGTS 159

  Fly    97 -----------VLFET-KVAEDIILDLHVGCV-----------------VEYLTFTTGEAMRVVK 132
                       ||.|| :.::.....:.:|.|                 ::.|.|.|.:.:|.:|
Human   160 IASSIRCMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEKLQELAFQTIQEIRHLK 224

  Fly   133 VKSILEHSWEDTSQKEIEKAVDNLKNEKPTFFNTETRSVLGLISQRLASSIDVETEYGQLTVELD 197
            ....|..| :|..::|:|..:.:.......|.:..|                 .|::.|:.:.| 
Human   225 EMYRLNLS-QDEIKQEVEDYLPSFCKWAGDFMHKNT-----------------STDFPQMQLSL- 270

  Fly   198 NIEMNFIPTNGDRVRLECNIQLDDGFVDKQGEILEVTKLFPTRIQEGEKCIVERVYVHMVVLGPE 262
                   |::..:....|||              ||.|  |..|:|.             :..|.
Human   271 -------PSDNSKDNSTCNI--------------EVVK--PMDIEES-------------IWSPR 299

  Fly   263 TYIL-KTDLPTGTDLHLGDIVLADLIECQYSKFTRRAIKITPLEKNFGATKLTQQSSMGSSGSGK 326
            ..:. |.|:..|..:|.|       .:.:|        ||.|||...|                 
Human   300 FGLKGKIDVTVGVKIHRG-------YKTKY--------KIMPLELKTG----------------- 332

  Fly   327 AVTVTGVNRFITAELWQKESVSLKLTNNLNRTLRLESITVCNDSESQLSVVSPLESKEISSGSEI 391
                             |||.|:                   :..||: |:..|.|:|..:..|.
Human   333 -----------------KESNSI-------------------EHRSQV-VLYTLLSQERRADPEA 360

  Fly   392 TVTFEIHTQFLGEAIEKYVLNFDLLKVRRVFTVIVCKTKEEVAEAEKRMIAAEALMAPGRNSQER 456
            .:...:.|..:......::...:|||:|......:.....:.|..:|..:|:    .|....:|:
Human   361 GLLLYLKTGQMYPVPANHLDKRELLKLRNQMAFSLFHRISKSATRQKTQLAS----LPQIIEEEK 421

  Fly   457 SRFYANQVWCNKVDVIPGQQIVTKRRFVALRLGCFEVPKELRQICLTSERRQEMIKAIEQHYSFL 521
            :..|.:|:          .......|.|..::.|..||  :..:....|..|.:.:...:::|..
Human   422 TCKYCSQI----------GNCALYSRAVEQQMDCSSVP--IVMLPKIEEETQHLKQTHLEYFSLW 474

  Fly   522 TEPLSIKTYM------HRFRLLLHLEEIE----CFVNFRNYDRDRAHFLRDGEFL-TLQIENLAE 575
            ...|::::..      |:...|:...|:|    |..|.  ...:....:.||::| ..|.::.|.
Human   475 CLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNL--IRMEHVKIVCDGQYLHNFQCKHGAI 537

  Fly   576 RRPSLVIGDTLRVINPWSDPDSQTTKSYEGIIHKV-------LFDRILLKFHSSF-----QEKYN 628
            ...:|:.||.:.|    |..:........|.:.::       |.||.|.....|.     ||:.|
Human   538 PVTNLMAGDRVIV----SGEERSLFALSRGYVKEINMTTVTCLLDRNLSVLPESTLFRLDQEEKN 598

  Fly   629 GEDYRLEFYFSRYSFRKQHHAISKIVGVMGEDFLFPSKVTKRENPQLDVYMKDDDMYLYDSK--L 691
            .:   ::......|...::..:||.:..:..||        || ||...|:  ..:..:|:|  :
Human   599 CD---IDTPLGNLSKLMENTFVSKKLRDLIIDF--------RE-PQFISYL--SSVLPHDAKDTV 649

  Fly   692 EWYNQSLNSIQKRAVFNILRGEAENIPYVLF-GPPGSGKTMTLIETLLQLVRNLPGARILVGTPS 755
            ....:.||..|::|:..:|..:    .|.|. |.||:|||.|:. ||::::... |..:|:.:.:
Human   650 ACILKGLNKPQRQAMKKVLLSK----DYTLIVGMPGTGKTTTIC-TLVRILYAC-GFSVLLTSYT 708

  Fly   756 NSSADLVTKRLIDSKALLQGDFIRLVSYNQVEKDLIPPEIMSYCATSDVGAVGSCEDKMMVTESG 820
            :|:.|.:..:|...|.    .|:||   .|::|  :.|.|..:           .|.::..::|.
Human   709 HSAVDNILLKLAKFKI----GFLRL---GQIQK--VHPAIQQF-----------TEQEICRSKSI 753

  Fly   821 LKLRCQAKFIGTHRITISTCTTLGNFLQLGFPAGHFTHVLFDEAGQCTEPETMVPIVMLTKKRSQ 885
            ..|....:...:..|..:||..:.:.:   |....|...:.|||.|.::|..:.|:..    ..:
Human   754 KSLALLEELYNSQLIVATTCMGINHPI---FSRKIFDFCIVDEASQISQPICLGPLFF----SRR 811

  Fly   886 VVLSGDPRQLQSIVTSRIASKMGFSISFLERLLERSPYRKDLQRFPESSGYNPLVLTKLLYNYRA 950
            .||.||.:||..:|.:|.|..:|.|.|..:||.:                 |...:.:|...||.
Human   812 FVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ-----------------NKSAVVQLTVQYRM 859

  Fly   951 LPSIMSIYSRLFYDDEL-----------IPVLSEKDSRESRLLSKLRCVFESE-KDIPQAHGTFF 1003
            ...|||:.::|.|:.:|           |.:...||       .||...|.:: .|.|...|.| 
Human   860 NSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKD-------VKLELEFYADYSDNPWLMGVF- 916

  Fly  1004 YGIIGENRQNNDSPSWFN------PQEVRE------------VFLMTIALYRANVTADQIGIITP 1050
                    :.|:...:.|      |::|.:            |||.:| ..:|..:...||||.|
Human   917 --------EPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSI-FVKAGCSPSDIGIIAP 972

  Fly  1051 YQKQVKMLRSMFIGTDVVMPKIGSVEEFQGQERDIILISTVRSSE-----EILRMDARFSLGFVR 1110
            |::|:|::..: :...:.|.::.:|:::||:::.|:|:|.|||::     |:|: |.|       
Human   973 YRQQLKIINDL-LARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLK-DWR------- 1028

  Fly  1111 CSKRLNVAVSRARAMMIIFG 1130
               |||||::||:..:|:.|
Human  1029 ---RLNVAITRAKHKLILLG 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
armiNP_001014556.1 AAA_11 698..902 CDD:289831 50/204 (25%)
AAA_19 720..768 CDD:289986 15/48 (31%)
DNA2 <840..1155 CDD:224037 83/326 (25%)
UvrD_C_2 909..1132 CDD:304668 64/257 (25%)
DNA2XP_006717743.1 Dna2 101..312 CDD:285859 48/271 (18%)
Cas4_I-A_I-B_I-C_I-D_II-B <291..427 CDD:294426 37/221 (17%)
TIGR00376 501..1062 CDD:273041 152/644 (24%)
P-loop_NTPase 655..905 CDD:304359 73/306 (24%)
AAA_12 835..1047 CDD:289832 64/257 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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