Protein Alignment armi and dna-2

DIOPT Version :9

• Sequence 1: NP_001014556.1
• Gene: armi / 38427
• FlyBaseID: FBgn0041164
• Length: 1188
• Species: Drosophila melanogaster
• Sequence 2: NP_496516.1
• Gene: dna-2 / 174809
• WormBaseID: WBGene00001016
• Length: 1069
• Species: Caenorhabditis elegans
• Alignment Length: 1155
• Identity: 234/1155 - (20%)
• Similarity: 423/1155 - (36%)
• Gaps: 368/1155 - (31%)

  Fly   196 LDNIEMNFIPT------------NGDRVRL-ECNIQLDDGF-----------VDKQGEILEVTKL 236
            :|:.| ||.||            ..:|::| ||:.  ||.|           :.|...:.....|
 Worm    35 VDSFE-NFCPTASSPKEKISPRSRSERIQLQECDD--DDSFDAPVISSKPPALPKDSGVSGFPCL 96

  Fly   237 FPTR------IQEGEK--------CIVERVYVHMVVLGPETYILKTDLPTGTDLHL------GD- 280
            |..:      .::|||        ||.:.....:|.|  :.:..:..:..|:.::|      ||
 Worm    97 FDDKNVIHLTARKGEKRDDCLDLECIDKEGTTRIVYL--QDHWSEMSIEAGSTINLIGAQAWGDR 159

  Fly   281 ---------IVLAD---LIEC---QYSKFTRRAIKITPLEKNFGATKLTQQSSMGSSGSGKAVTV 330
                     ||:.:   |:.|   ..:.|..|            .|.|..:...|:: |.||:.:
 Worm   160 DFLVNDDVGIVILNPDALVPCTAVASATFCAR------------KTVLNDKFKFGNA-SNKAMLL 211

  Fly   331 TGVNR--FITA--------------ELWQK-------ESVSLKLTNN-LNRTLRLESITVCN--- 368
            ..:..  |.||              ::|.|       |.|:|..|.: |:..|:.....:|.
 Worm   212 GTIMHEIFQTAITSKKRPVMENDLMKIWNKQAPKYAEELVALSFTPSCLDAELQPYFSIICGWIN 276

  Fly   369 ----DSESQLSVVSPLESKEISSGSEITVTFEIHTQF----LGEAIEKYVLNFDLLKVRRVFTVI 425
                .|.|..|...||.||     ||:...::|....    ||
 Worm   277 KHYPLSNSFFSKREPLPSK-----SELLEVYDIEENIWDSKLG---------------------- 314

  Fly   426 VCKTKEEVAEAEKRMIAAEAL-MAPGRNSQERSRFYANQVWCNKVDVIPGQQIVTKRRFVALRLG 489
             .|.|.:|....|.....|:| :..|::|            |:....  ||.::    :..::..
 Worm   315 -LKGKIDVTMRTKSRGGMESLELKTGKSS------------CSSEHT--GQVLL----YCMMQSS 360

  Fly   490 CFEVP---------KELRQICLTSERRQEMIKAIEQ------HY-----SFLTEPLSIKTYM--- 531
            .:|.|         |:....|:| .|..:::..::|      |:     |.|.:|.....:.
 Worm   361 RYEQPIGPGNILYLKDGASHCVT-PRAADLLGVLQQRNKLSVHFEDPTTSNLPDPRQDSRFCDKC 424

  Fly   532 -HRFRLLLHLEEIECF-------VNF---------RNYDRDRAHFLR--------DGEFLTLQ-- 569
             |:.....:.:..|.|       .||         :|:....|:::|        :.|.:|.|
 Worm   425 DHKTMCSFYQKTEENFSKSNDKMKNFAENEMAHLEQNHIEYAANWIRWISAEWKCERERMTSQNK 489

  Fly   570 ---IENLAERRPSLVIGDTLRVINPWSDPDSQTTK---SYE------------------------ 604
               ::::.||   :..|..|..::|.|:..|.:.|   |:.
 Worm   490 DLWLKSVQER---VEEGTCLSDLHPVSEEMSNSQKIIISFSRKFLKSSNTPTFRPGDVCLLSNKK 551

  Fly   605 ------GIIHKVLFDRILLKFHSSFQEKYNGEDYRLEFYFSRYSFRKQHH-AISKIVGVMGEDFL 662
                  .:|.:|..|:.::|..:   :|.....|...|:..:|:....|. .:..:|.::..|
 Worm   552 HIAIGFALIDEVSDDQQIVKIST---DKTIKSRYEAPFHLDKYTSMSTHSTTLGNLVYLLQND-- 611

  Fly   663 FPSKVTKR-ENPQLD----VYMKDDDMYLYDS-KLEWYNQSLNSIQKRAVFNILRGEAENIPYVL 721
               ::.|| .|..:|    :.|......|..: |.......||:.|::||.:.|..|    .:::
 Worm   612 ---EIGKRLRNILVDLLPPIIMDATGFNLTPAIKKIIIKAKLNNEQRKAVVHALATE----DFMM 669

  Fly   722 F-GPPGSGKTMTLIETLLQ-LVRNLPGARILVGTPSNSSADLVTKRLIDSKALLQGDFIRLVSYN 784
            . |.|||||| |||..|:| ||..  ..::|:...::|:.|.:..:|  :|.:.....:||.|.:
 Worm   670 VEGLPGSGKT-TLISVLIQCLVAT--NKKVLLAAFTHSAVDNILTKL--TKEVAAEKILRLGSSS 729

  Fly   785 QVEKDLIPPEIMSYCATSDVGAVGSCEDKMMVTESGLKLRCQAKFIGTHRITIST-----CTTLG 844
            .::.|:                      |.|..::.|:.....::....|..:.|     ||...
 Worm   730 SIKDDI----------------------KKMTLKAKLENETSEEYYAAVRKVMKTTPIVACTCHH 772

  Fly   845 NFLQLGFPAGHFTHVLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGF 909
            ...:|.|...||..|:.|||....|| .::|::..:.|   .||.||.:||..:|.||.|.:.|.
 Worm   773 VPRELLFSYRHFDVVIVDEASMVLEP-LLLPVLATSNK---FVLVGDCKQLTPLVVSRKAKQEGA 833

  Fly   910 SISFLERLLERSPYRKDLQRFPESSGYNPLVLTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEK 974
            .||.:|:|.:.                :|.|:..|...||....|..:.|:|||::.|| ..:|.
 Worm   834 GISTMEKLQQS----------------HPGVVVSLTSQYRMNREISVLSSKLFYENRLI-CGNES 881

  Fly   975 DSRES-------------------RLLS---KLRCVFESEKDIPQAHGTFFYGIIGENRQNNDSP 1017
            .||.|                   :.||   |..|||...:           ..|....|..|..
 Worm   882 VSRSSLDRTGDYIVAMDDGSDHIRKALSGDIKDSCVFLDTQ-----------STINSKMQCEDGE 935

  Fly  1018 --SWFNPQEVREVFLMTIALYRANVTADQIGIITPYQKQVKMLRSMFIGTDVVMPKIGSVEEFQG 1080
              ...|..|.:.:..:......:.|...:||:::.|::||..:|.:....::   ::.:::.:||
 Worm   936 GGGMCNDGEAKLISELCQQFVMSGVKPHEIGVMSAYRRQVDHIRGILNSDEL---EVNTIDSYQG 997

  Fly  1081 QERDIILISTVRSSEEILRMDARFSLGFVRCSKRLNVAVSRARAMMIIFG 1130
            :|:.:|:.|...::....:.:      .::..:|:|||::|||..:::.|
 Worm   998 REKRVIIWSLTWTNNSTKKSE------LLKDERRVNVALTRARQKLVVVG 1041

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
armi	NP_001014556.1	AAA_11	698..902	CDD:289831	56/210 (27%)
		AAA_19	720..768	CDD:289986	18/49 (37%)
		DNA2	<840..1155	CDD:224037	76/315 (24%)
		UvrD_C_2	909..1132	CDD:304668	51/246 (21%)
dna-2	NP_496516.1	Dna2	122..325	CDD:285859	46/245 (19%)
		Cas4_I-A_I-B_I-C_I-D_II-B	<294..430	CDD:294426	30/182 (16%)
		TIGR00376	480..1062	CDD:273041	141/645 (22%)
		P-loop_NTPase	650..861	CDD:304359	69/261 (26%)
		AAA_12	834..1044	CDD:289832	51/245 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910