DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sty and Notch2

DIOPT Version :9

Sequence 1:NP_523902.2 Gene:sty / 38424 FlyBaseID:FBgn0014388 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_035058.2 Gene:Notch2 / 18129 MGIID:97364 Length:2473 Species:Mus musculus


Alignment Length:144 Identity:34/144 - (23%)
Similarity:46/144 - (31%) Gaps:57/144 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   379 PRC----GRCRCEQCQSPRPLPQTWVCNKTCLCSAESVIDYASCLCCAKALFYHCARDNDLDCDD 439
            |||    ..|..:.||:          :.|||    ..|...:|||.......||    :|:.::
Mouse   451 PRCEMDINECHSDPCQN----------DATCL----DKIGGFTCLCMPGFKGVHC----ELEVNE 497

  Fly   440 GNGTPCVDN----------PCSCGPYKRTQRWGWLGALSIF-------LPCLWFYWPMRGCMKLC 487
            ....|||:|          .|.|.|       |:.|.:...       .|||      .|.    
Mouse   498 CQSNPCVNNGQCVDKVNRFQCLCPP-------GFTGPVCQIDIDDCSSTPCL------NGA---- 545

  Fly   488 EKCYGRFAGRGCRC 501
             ||.....|..|:|
Mouse   546 -KCIDHPNGYECQC 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
styNP_523902.2 Sprouty 384..488 CDD:282994 26/120 (22%)
Notch2NP_035058.2 EGF_CA 109..143 CDD:238011
EGF_CA 182..218 CDD:238011
EGF_CA 260..296 CDD:238011
EGF_CA 298..335 CDD:238011
EGF_CA 415..454 CDD:238011 2/2 (100%)
EGF_CA 456..492 CDD:238011 12/53 (23%)
EGF_CA 495..530 CDD:238011 9/41 (22%)
EGF_CA 532..567 CDD:238011 9/38 (24%)
EGF_CA 570..604 CDD:238011
EGF_CA 608..643 CDD:238011
EGF_CA 645..679 CDD:238011
EGF_CA 682..717 CDD:238011
EGF_CA 757..793 CDD:238011
EGF_CA 795..831 CDD:238011
EGF_CA 873..909 CDD:238011
EGF_CA 911..947 CDD:238011
EGF_CA 949..985 CDD:238011
EGF_CA 987..1022 CDD:238011
EGF_CA 1025..1061 CDD:238011
EGF_CA 1117..1147 CDD:238011
EGF_CA 1151..1185 CDD:238011
EGF_CA 1188..1223 CDD:238011
EGF_CA 1225..1262 CDD:238011
EGF_CA 1264..1302 CDD:238011
EGF_CA <1312..1343 CDD:238011
Notch 1423..1456 CDD:333809
Negative regulatory region (NRR). /evidence=ECO:0000250 1425..1679
NL 1459..1496 CDD:197463
Notch 1501..1534 CDD:333809
NOD 1540..1591 CDD:311024
NODP 1621..1675 CDD:311559
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1755..1778
ANKYR <1820..1932 CDD:223738
ANK repeat 1828..1875 CDD:293786
ANK 1 1828..1872
ANK 2 1877..1906
ANK repeat 1878..1908 CDD:293786
ANKYR 1880..2067 CDD:223738
ANK 3 1910..1940
ANK repeat 1944..1975 CDD:293786
ANK 4 1944..1973
Ank_2 1949..2041 CDD:338493
ANK repeat 1977..2008 CDD:293786
ANK 5 1977..2006
ANK repeat 2010..2041 CDD:293786
ANK 6 2010..2039
GGN <2070..>2390 CDD:317988
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2098..2117
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2122..2169
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2382..2473
DUF3454 2385..2441 CDD:314760
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.928771 Normalized mean entropy S2
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

Return to query results.
Submit another query.