DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ids and Arsk

DIOPT Version :9

Sequence 1:NP_647814.1 Gene:Ids / 38423 FlyBaseID:FBgn0035445 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_084123.2 Gene:Arsk / 77041 MGIID:1924291 Length:556 Species:Mus musculus


Alignment Length:557 Identity:138/557 - (24%)
Similarity:222/557 - (39%) Gaps:137/557 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ARLLLSLMMPVLLDAAAPPRR-----------PNVVMVIFDD------LRPVIGAYGDTLASTPY 51
            |.|||.:.:...|..|||..|           ||||:|..|.      .:|     |..:...|:
Mouse     3 AMLLLLVSVVAALALAAPAPRTQKKRMQVNQAPNVVLVASDSFDGRLTFQP-----GSQVVKLPF 62

  Fly    52 LDNFARGSH--IFTRVYSQQSLCAPSRNSLLTGRRPDTLHLYDFYSYWRTFTG---NFTTLPQYF 111
            : ||.| :|  .|...|:...:|.|||.::.:|.   ..||.:   .|..|.|   |:||.....
Mouse    63 I-NFMR-AHGTTFLNAYTNSPICCPSRAAMWSGL---FTHLTE---SWNNFKGLDPNYTTWMDIM 119

  Fly   112 KEHGYYTYSCGKV----FHPGLSSNNTDDYPLSWSAP-AFRPRTEQFMNSPVCPDKEGILRKNLI 171
            ::|||.|...|||    .|..: ||..:    :|:.. ||..|.|......:.|||.   |:.::
Mouse   120 EKHGYQTQKFGKVDYTSGHHSI-SNRVE----AWTRDVAFLLRQEGRPIINLIPDKN---RRRVM 176

  Fly   172 CPVELQTQPYKTLPDIESVAEALRFVGSRSRHSQEPFFLAMGFHKPH--------INFRFPRQFL 228
                        ..|.::..:|:.::  |..:..:||.|.:|.:.||        .||.     .
Mouse   177 ------------TKDWQNTDKAIEWL--RQVNYTKPFVLYLGLNLPHPYPSPSSGENFG-----S 222

  Fly   229 SRFNLSQFY--NYTEDSLKPPDMPAVAWNPYTDVRARDDFKHSNISFPYGPISPLQAAQIRQSYY 291
            |.|:.|.::  ....|::|.|     .|...:.:.. .||..|......|..:..:...||..||
Mouse   223 STFHTSLYWLEKVAYDAIKIP-----KWLTLSQMHP-VDFYSSYTKNCTGKFTENEIKNIRAFYY 281

  Fly   292 ASVSYVDDLFGKLIGGLD----LDETVVVALGDHGWSLGEHAEWAKYSNFEVALRVPLIIRSP-- 350
            |..:..|.:.|::|..|.    |.:|:|:...|||....||.::.|.|.:|.::.|||::..|  
Mouse   282 AMCAETDAMLGEIILALHKLDLLQKTIVIYTSDHGEMAMEHRQFYKMSMYEASVHVPLLMMGPGI 346

  Fly   351 ----QFPVAQTKYYHGITELLDVFPTLVDLAGL---PKLDKCQSSQELTCGEGKSLYHQLMGLGR 408
                |.|        .:..|:|::||::|:||:   |.|               |.|..|..|..
Mouse   347 KANLQVP--------SVVSLVDIYPTMLDIAGIALPPNL---------------SGYSLLTLLSN 388

  Fly   409 ADEHVALSQYPRPGMLPTKHPNSDKPKLRNIKIMGYSLRTDIYRYTMWVRFHAQNFSRDWHDVYG 473
            |..:....::.||..:.::....      |.....|.|||..::|..:.         |...|. 
Mouse   389 ASANEQAFKFHRPPWILSEFHGC------NANASTYMLRTGQWKYIAYA---------DGASVQ- 437

  Fly   474 EELYDHRLDSGEELNLMPLPQFDDVRQRLRRRLMEMV 510
            .:|:|..||..|..|:  ..:|.::...|.::|..:|
Mouse   438 PQLFDLSLDPDELTNI--ATEFPEITYSLDQKLRSIV 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdsNP_647814.1 AslA 21..509 CDD:225661 130/537 (24%)
iduronate-2-sulfatase 24..495 CDD:293754 126/520 (24%)
ArskNP_084123.2 AslA 34..455 CDD:225661 125/507 (25%)
ARSK 35..448 CDD:293781 123/497 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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