DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ids and sgsh

DIOPT Version :9

Sequence 1:NP_647814.1 Gene:Ids / 38423 FlyBaseID:FBgn0035445 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001116740.1 Gene:sgsh / 563849 ZFINID:ZDB-GENE-030131-4958 Length:511 Species:Danio rerio


Alignment Length:536 Identity:127/536 - (23%)
Similarity:207/536 - (38%) Gaps:128/536 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RRPNVVMVIFDDLRPVIGAYGDTLASTPYLDNFARGSHIFTRVYSQQSLCAPSRNSLLTGRRPDT 87
            |..||:::|.||.......|.:|:..||:|...::.|.||...::..|.|:|||:::|||.....
Zfish    22 RSRNVLLIIADDGGFETDVYNNTVVQTPHLRALSKRSLIFKNAFTSVSSCSPSRSTILTGLPQHQ 86

  Fly    88 LHLYDFYS---YWRTFTGNFTTLPQYFKEHGYYTYSCGKVFH--PGLSSNNTDDYPLSWSAPAFR 147
            ..:|..:.   ::.:|.| ..:||...|....:|...||. |  ||      ..||..:   |:.
Zfish    87 NGMYGLHQGVHHFNSFDG-VQSLPLLLKRANIHTGIIGKK-HVGPG------PVYPFDF---AYT 140

  Fly   148 PRTEQFMNSPVCPDKEGILRKNLICPVELQTQPYKTLPDIESVAEALRFVGSRSRHSQE-PFFLA 211
            ..|...:.          :.:| |..::|..:.:     .:|..|      .||...:| ||||.
Zfish   141 EETNSVLQ----------VGRN-ITKIKLLVRKF-----FQSHKE------ERSETKEERPFFLY 183

  Fly   212 MGFHKPHINFRFPRQFLSRFNLSQ---------FYNYTEDSLKPPDMPAVAWNP-YTDVRARDDF 266
            :.||.||           |...||         |.|......:.||     |.| |        :
Zfish   184 VAFHDPH-----------RCGHSQPQYGVFCEKFGNGESGMGRIPD-----WEPKY--------Y 224

  Fly   267 KHSNISFPYG-PISPLQAAQIRQSYYASVSYVDDLFGKLI-----GGLDLDETVVVALGDHGWSL 325
            ....:..||. |.:|...|.| .:.|.:||.:|...|.::     .|.: ::|:|:...|:|...
Zfish   225 SPDQVKVPYFIPDTPAARADI-AAQYTTVSRLDQGIGLVLEELRKAGFE-NDTLVIYSSDNGIPF 287

  Fly   326 GEHAEWAKYSNFEVALRVPLIIRSPQFPVAQTKYYHGITELLDVFPTLVDLAGLP----KLDKCQ 386
            ..    .:.:.:...::.|:::.||:......|.......|||:.||::|...||    .|...|
Zfish   288 PN----GRTNLYGSGVKEPMLLSSPEHQQRWGKLSQAYVSLLDITPTILDWFSLPYPSYSLSMSQ 348

  Fly   387 SSQELTCGEGKSLYHQLMGLGRADE-------HVALSQYPRPGMLPTKHPNSDKPKLRNIKI-MG 443
             ..|||   |:||...|:.....|.       |.....||    :.:.|....: .|.|:.. |.
Zfish   349 -PVELT---GRSLLPALISEPSWDTVFSSQSLHEVTMFYP----MRSIHKGPYR-LLHNLHYRMP 404

  Fly   444 YSLRTDIY---------------RYTMWVRFHAQNFSRD-WHDVYGEELYDHRLDSGEELNLMPL 492
            :.:..|.|               |.|.|.:...:.:.|. |      ||:|.|.|..|::||...
Zfish   405 FPIDQDFYISPTFQDLLNRTQSGRPTGWFKTLNEYYYRQRW------ELFDVRTDPMEKVNLAGD 463

  Fly   493 PQFDDVRQRLRRRLME 508
            ..:.:|.:.|:..|::
Zfish   464 LDYSEVLESLKDLLLK 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdsNP_647814.1 AslA 21..509 CDD:225661 127/536 (24%)
iduronate-2-sulfatase 24..495 CDD:293754 123/520 (24%)
sgshNP_001116740.1 SGSH 25..481 CDD:293751 126/533 (24%)
AslA 25..461 CDD:225661 122/513 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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