DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ids and arsk

DIOPT Version :9

Sequence 1:NP_647814.1 Gene:Ids / 38423 FlyBaseID:FBgn0035445 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001070625.1 Gene:arsk / 562412 ZFINID:ZDB-GENE-060929-332 Length:523 Species:Danio rerio


Alignment Length:521 Identity:123/521 - (23%)
Similarity:211/521 - (40%) Gaps:117/521 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RPNVVMVIFD------DLRPVIGAYGDTLASTPYLDNFARGSHIFTRVYSQQSLCAPSRNSLLTG 82
            |||:||::.|      ..:|     |:.:...||::.......:|...|:...:|.|||.::.:|
Zfish    26 RPNIVMIMSDAFDGRLTFQP-----GNKVVQLPYINYMRELGSVFLNSYTNSPICCPSRAAMWSG 85

  Fly    83 RRPDTLHLYDFYSYWRTFTGNFTTLPQYFKEHGYYTYSCGKVFHPG---LSSNNTDDYPLSWSAP 144
            :   .:||...::..:....|.||.....::.||:|:|.||:.:..   ..||..:    :|:  
Zfish    86 Q---FVHLTQSWNNNKCLHPNATTWMDDLRKSGYHTHSMGKLDYTSGHHSVSNRVE----AWT-- 141

  Fly   145 AFRPRTEQFMNSPVCPDKEGILRKNLICPVELQTQPYK--TLPDIESVAEALRFVGSRSRHSQEP 207
                     .:.|....:||....:|:.....:....|  |:.|     .|::::.:.:....:|
Zfish   142 ---------RDVPFLLRQEGRPVTDLVGDASTKRVMIKDWTITD-----AAVQWIRNTTASLTQP 192

  Fly   208 FFLAMGFHKPHINFRF----PRQFLSRFNLSQFY----NYTEDSLKPPDMPAVAWNPYTDVRARD 264
            |.|.:|.:.|| .:|.    |....|.|..|.::    :|.:.|:.       .|..:.|:...|
Zfish   193 FALYLGLNLPH-PYRTDSLGPTAGGSTFRTSPYWLNKVSYNQVSVP-------KWLRFKDMHPVD 249

  Fly   265 DFK--HSNISFPYGPISPLQAAQIRQSYYASVSYVDDLFGKLIGGL----DLDETVVVALGDHGW 323
            .:.  ..|.|   |..:..:...||..|||..:..|.:.|:::..|    .|::|||:...|||.
Zfish   250 YYSTVTKNCS---GHFTEEEIRNIRAFYYAMCAETDGMLGEVMAALRDTGSLNKTVVLFTSDHGD 311

  Fly   324 SLGEHAEWAKYSNFEVALRVPLIIRSP--------QFPVAQTKYYHGITELLDVFPTLVDLAGLP 380
            ...||.::.|.|.||.:..|||:|..|        ..||:          |:|::||::||||:|
Zfish   312 LAMEHRQFYKMSMFEGSSHVPLLIMGPGVKSGFEVSLPVS----------LVDIYPTVLDLAGVP 366

  Fly   381 KLDKCQSSQELTCGEGKSLYHQLMGL-GRADEHVALSQYPRPGMLPTKHPNSDKPKLRNIKIMGY 444
            :             .|....|.|:.| .|...|   |..|.|....:::...      |.....|
Zfish   367 Q-------------TGGLSGHSLIPLISRVSIH---SAEPHPAWAFSEYHGC------NANTSTY 409

  Fly   445 SLRTDIYRYTMWVRFHAQNFSRDWHDVYGEELYDHRLDSGEELNLMPLPQFDDVRQRLRRRLMEM 509
            .||...::|..:.         |..:| ..:|::...|..|..|:  ..||.||.|.|.:.|..:
Zfish   410 MLRIAEWKYIAYA---------DGLNV-PPQLFNLSKDESELRNI--ASQFPDVCQDLDKLLRSI 462

  Fly   510 V 510
            |
Zfish   463 V 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdsNP_647814.1 AslA 21..509 CDD:225661 122/518 (24%)
iduronate-2-sulfatase 24..495 CDD:293754 115/504 (23%)
arskNP_001070625.1 AslA 25..445 CDD:225661 115/501 (23%)
ARSK 27..439 CDD:293781 112/492 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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